Parafrankia sp. EAN1pec: Franean1_1189
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Entry
Franean1_1189 CDS
T00608
Name
(GenBank) guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Franean1_1189
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fre03019
]
Franean1_1189
03016 Transfer RNA biogenesis [BR:
fre03016
]
Franean1_1189
Enzymes [BR:
fre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Franean1_1189
Messenger RNA biogenesis [BR:
fre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Franean1_1189
Transfer RNA biogenesis [BR:
fre03016
]
Prokaryotic type
tRNA degradation factors
Franean1_1189
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
S1_RRP5
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
ABW10643
UniProt:
A8L6G1
LinkDB
All DBs
Position
1413593..1415782
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AA seq
729 aa
AA seq
DB search
MDDSTQAAEAVITTPTGARTVRFETGRLARQAAGAVVAHLGDTMVLSATTVSRSPKEQLD
FFPLTVDVEERMYAAGRIPGSFFRREGRPSEDAILTCRLIDRPLRPSFAKGLRNEIQVVA
TVLALDPDTLYDVVAINAASASTMLAGLPFSGPIGATRVGYVDGDWIAFPTHSELERATF
DMVVAGRVLEDGSDVAIMMVEAEATPGTVALVAGGAPAPTEEVVAAGLEAAKPAIRELCR
AQSELAAGAAKPQREFPLFIDYHDDVLETLTAAVGEELAAALRIAGKAERETELERVRAL
AVEKVSGQFEGRDKEISPAYRALTKKLVRSRIVTDGVRIDGRSTTEIRELSAEVDYIPRV
HGSALFERGETQILGVTTLAMLRMEQTVDTLNPDRTKRYMHNYNFPPYSTGETGRVGSPK
RREIGHGALAERALLPVLPSREEFPYAIRQVSEALSSNGSTSMGSVCASTLSLLNAGVPL
KAPVAGIAMGLIREGDAFVTLTDILGAEDAYGDMDFKVAGTQEFVTALQLDTKLDGIPAS
VLAGALQQARAARLTILEVMAEAIGGPDEMSAHAPRVISVKIPVDKIGEVIGPKGKMINQ
IQADSGAEITVEDDGTIYIGAADGPAAETARSAINAIANPQMPEVGERYLGTIVKITNFG
AFVSLTPGKDGLLHVSKLKQLAGGKRVEKVEDVLSVGQKLQVEITEIDARGKISLAPGAE
SIDTVSAGS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
gtggacgactcgacacaggcggcagaggccgtcatcacgaccccgaccggggcccgcacg
gtccgtttcgagaccggccggctggccaggcaggccgctggcgcggtcgtcgcccacctc
ggcgacacgatggtcctctcggcgacgacggtcagccgctcgccgaaggagcagctggac
ttcttccccctgacggtggacgtcgaggagcggatgtacgcggccgggcgcatccccggc
tcgttcttccgccgcgagggccgccccagtgaggacgcgatcctcacctgccggctcatc
gaccggccgttgcggccgtcgttcgccaaggggctgcgcaacgagatccaggtcgtggcg
accgtgctcgccctcgaccccgacaccctgtacgacgtggtcgcgatcaacgcggcgagc
gcgtcgacgatgctggccgggctgcccttcagcgggccgatcggcgccacccgggtcggc
tacgtcgacggcgactggatcgccttcccgacgcacagcgagctggagcgggcgaccttc
gacatggtcgtggccggccgggtgctcgaggacggctccgacgtcgcgatcatgatggtc
gaggcggaggcgacgccgggcacggtggccctggtggccggtggcgcgccggcgccgacc
gaggaggtcgtcgccgcgggcctggaggccgccaagccggccatccgcgagctgtgccgg
gcgcagagcgagctggccgcgggcgcggcgaagccgcagcgcgagttcccgctgttcatc
gactaccacgacgacgtgctggagaccctgacggcggcggtcggcgaggagcttgcggcg
gcactgcgcatcgccggcaaggccgagcgcgagaccgagctggagcgggtccgggcgctg
gccgtggagaaggtgtccggccagttcgagggccgcgacaaggagatcagcccggcctac
cgggcgctgaccaagaagctggtccgctcgcgcatcgtcaccgacggtgtgcgcatcgac
gggcgttccacgaccgagatccgcgagctgtcggccgaggtcgactacatcccgcgggtg
cacggctcggcgctgttcgaacggggcgagacgcagatcctcggcgtcacgacgctggcg
atgctccggatggagcagaccgtcgacacgctcaacccggaccgcaccaagcggtacatg
cacaactacaacttcccgccgtactccaccggtgagaccggccgggtgggctcgccgaag
cggcgcgagatcggccacggcgcgctcgcggagcgggcgctgctgccggtgctgcccagc
cgcgaggagttcccctacgcgatccgccaggtctccgaggcgctgagctccaacggctcg
acgagcatgggctcggtctgcgcgagcacgctgtcgctgctgaacgccggtgtgccgctg
aaggccccggtcgcgggcatcgcgatgggcctgatccgggagggcgacgccttcgtcacc
ctgaccgacatcctcggggcagaggacgcctacggcgacatggacttcaaggtcgccggc
acgcaggagttcgtgaccgccctgcagctggacaccaagctcgacggcatcccggcgtcg
gtgctcgccggcgcgctgcagcaggcgcgggcggcccggctgacgatcctcgaggtgatg
gccgaggccatcggcgggccggacgagatgtccgcgcacgccccgcgggtcatctccgtg
aagatccccgttgacaagatcggcgaggtcatcgggcccaagggcaagatgatcaaccag
atccaggcggactccggtgcggagatcaccgtcgaggacgacggcacgatctacatcggt
gccgccgacgggccggcggccgagaccgcccgctccgcgatcaacgcgatcgcgaacccg
cagatgcccgaggtcggcgagcgctacctcggtaccatcgtgaagatcacgaacttcgga
gccttcgtctcgctgacgcccggcaaggacggcctgctgcacgtcagcaagctcaagcag
ctcgccggcggcaagcgcgtcgaaaaggtcgaggacgtgctgtcggtgggccagaagctc
caggtggagatcaccgagatcgacgcccgcggcaagatcagcctcgcgccgggcgcggag
tccatcgacaccgtaagcgccggatcctga
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