Parafrankia sp. EAN1pec: Franean1_1226
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Entry
Franean1_1226 CDS
T00608
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fre03016
]
Franean1_1226
Enzymes [BR:
fre01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Franean1_1226
Transfer RNA biogenesis [BR:
fre03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Franean1_1226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
Motif
Other DBs
NCBI-ProteinID:
ABW10680
UniProt:
A8L6J8
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All DBs
Position
1467206..1468690
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AA seq
494 aa
AA seq
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MSGRSYQVRTFGCQMNVHDSERLAGLLESAGYVPAPEGSDADVVVFNTCAVRENADNRLY
GNLGHLYPAKKSNPAMQIAVGGCLAQKDRSVILDRAPWVDVVFGTHNIHRLPVLLERARH
NSAAQVEIAEALEVFPSSLPARRASHHSAWVSISVGCDNTCTFCIVPSLRGGERDRRPGD
VLAEVEALVAEGALEITLLGQNVNSYGRSLGDPGAFAKLLRACGRVEGLERVRFTSPHPR
DFTDDVIEAMAQTPNVCPQLHMPLQSGSDVVLRRMRRSYRRERFLGIVERVRAAMPDAAI
TTDIIVGFPGETEADFADTLDVVRTARFAGAFTFKYSPRPGTPAAEMDGAVDPAVVSERY
GRLASLQDEMSWAENRAQVGRRVEIVVAEGEGRKDSATGRLSGRARDGRLVHLLVTGPHA
QEGLVRPGDVVETVVTRGAPHHLTADGPLLTHRRTRAGDAWAAGRAIAGDTPRPDRPAVS
LGMPQLRPSAPAAR
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
gtgagcggccgtagctatcaggtccggacgttcggctgtcagatgaacgtgcacgactcc
gaacggctcgccggccttctcgagtccgccggctacgttccggccccggaggggtccgac
gccgacgtcgtcgtgttcaacacctgcgctgtccgtgagaacgccgacaaccggttgtac
ggaaacctcggtcatctgtacccggcgaagaagagcaacccggcgatgcagatcgcggtg
ggtggctgcctcgcgcagaaggaccggtcggtgatcctggatcgcgcgccctgggtcgac
gtcgtgttcggcacccacaacatccatcggctgccggtgctgctcgagcgggcccggcac
aactccgccgcccaggtggagatcgccgaggcgctcgaggtcttcccgagcagcctgccg
gcccgccgggccagccatcactcggcgtgggtcagcatcagtgtgggctgcgacaacacc
tgcaccttctgcatcgtgccgagcctgcgcggcggtgagcgcgaccggcgtcccggcgac
gtgctcgccgaggtggaggcgctggtcgccgagggcgcgctggagataacgctgctcggc
cagaacgtgaactcctacgggcgctcactgggtgacccgggcgcgttcgcgaagctgctg
cgcgcgtgcgggcgggtcgaggggctggagcgggtccgtttcacctcaccgcatccgcgt
gatttcaccgacgacgtcatcgaggcgatggcgcagacgccgaacgtgtgcccacagctg
cacatgccgctgcagtcggggtcggacgtggtgctgcgccggatgcggcgcagctaccgc
cgggagcgtttcctcggcatcgtcgagcgggtccgcgcggccatgccggacgccgcgatc
accaccgacatcatcgtcggattcccgggtgagaccgaggccgacttcgccgacaccctg
gacgtcgtccgtaccgcgcgtttcgccggggcgttcaccttcaagtactccccgcgtccc
ggcacgcccgcggccgagatggacggcgcggtcgatcccgcggtggtctccgagcgctac
gggcggctcgcgagcctgcaggacgagatgtcgtgggcggagaaccgggcgcaggtcggg
cgccgggtcgagatcgtcgtggcagagggggaggggcgcaaggactccgccaccggccgc
ctctccggacgcgcccgcgacggccgcctcgtccacctgctggtgaccgggccgcatgcg
caggaggggctcgtccggccgggtgacgtcgtggagaccgtggtgaccaggggcgcgccg
caccacctgacggcggacggcccgctgctcacccaccgccggacccgcgccggtgatgcc
tgggccgccggccgcgccatcgccggcgacaccccgcgcccggaccgccccgcggtctct
ctggggatgccgcagctgcgcccgagcgcccccgccgcgcggtga
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