Parafrankia sp. EAN1pec: Franean1_1237
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Entry
Franean1_1237 CDS
T00608
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03086
RNA polymerase primary sigma factor
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Franean1_1237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fre03021
]
Franean1_1237
Transcription machinery [BR:
fre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Franean1_1237
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
HTH_25
Motif
Other DBs
NCBI-ProteinID:
ABW10691
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Position
1484052..1485323
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AA seq
423 aa
AA seq
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MTLPALELAERTDESRPRPRRTRRSASPVRNTPSRTLAAVPDELDELDVSAIAELIARGR
ETGELSRSELREALEAADIGVELLPALISRLGAAGIDLVEEEEERVTPGAPAAGRTVADH
AGTADLVRMYLREIGKVPLLNAAQEVELSKRVEAGLFAEHKLDTDQDLADDLRRDLGVLV
TDGQAAKQQLVSANLRLVVSVAKKYSGRGMTLLDLVQEGNLGLIRAVEKFDYAKGYKFST
YATWWIRQAIGRALADQARTIRIPVHVVEQINKITRLQRQLVSTLGREPTDEELALELDM
PIEQVVELRRYAQDTVSLETSVGDDGDSVLGDFIEDSDATSPADAASYGAMQDEIDNVLG
ALNPREREVMRLRFGLADGKQHTLAEVGNRLGLTRERIRQIERDTLRELRKPAVAGRLRE
FLD
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcctgccctggaactagccgagcgcaccgacgagtcacgcccgcgcccgcgg
cgtacccgtcgctccgcttctcctgtccgtaacactccaagccgcacgctggccgcggtc
cccgacgagctcgacgagctcgacgtctccgccatcgcggaactcatcgcgcgtggccgc
gagaccggcgagctcagccgttccgagctccgtgaggctctcgaggccgccgacatcggc
gtcgagctgctgcccgcgctgatctcccgcctgggtgccgccgggatcgacctcgtcgaa
gaagaagaggagcgcgtcacccccggcgctccggccgccggccgcacggtcgccgaccac
gccggcaccgccgacctcgtccgcatgtacttgcgggagatcggcaaggtcccgctgctc
aacgccgctcaggaggtcgagctctccaagcgcgtcgaggcgggcctgttcgccgagcac
aagctcgacaccgaccaggacctggccgacgacctgcgccgggatctcggcgtgctggtc
accgacggccaggctgccaagcagcagctggtctcggccaacctgcgcctggtggtgtcg
gtcgccaagaagtacagcggccggggtatgacgctgctggacctcgtccaggagggaaac
ctgggcctgatccgcgcggtcgagaagttcgactacgcgaagggctacaagttctccacc
tacgccacctggtggatccgtcaggcgatcggccgcgcgctggccgaccaggcccgcacg
atccgtatcccggtgcacgtggtcgagcagatcaacaagatcacccggctgcagcgccag
cttgtctcgaccctcggccgcgagccgacggacgaggagctcgcgctcgagctggacatg
ccgatcgagcaggtcgtcgaactgcgccgctacgcgcaggacacggtcagcctggagacg
tccgtcggtgacgacggcgactccgtgctcggcgacttcatcgaggactcggacgcgacg
tcgcccgccgacgccgcctcctacggcgccatgcaggacgagatcgacaacgtcctcggt
gcgctgaaccctcgtgagcgcgaggtcatgcggctgcgtttcgggctcgccgacgggaag
cagcacaccctcgccgaggtcggcaaccggctcgggctcacccgtgagcgcatccgccag
atcgagcgggacacgctgcgggagctgcgcaagccggccgtggccggaaggctgcgcgag
ttcctcgactga
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