Parafrankia sp. EAN1pec: Franean1_1355
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Entry
Franean1_1355 CDS
T00608
Name
(GenBank) TrwC relaxase
Organism
fre
Parafrankia sp. EAN1pec
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Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
AAA_22
AAA_16
HTH_17
AAA_11
Viral_helicase1
TraI_hel_assoc_N
UvrD_C_2
AbiEi_4
T2SSE
NACHT
SIM_C
ATPase_2
AAA
ATP_bind_1
Motif
Other DBs
NCBI-ProteinID:
ABW10803
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All DBs
Position
1633885..1638534
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AA seq
1549 aa
AA seq
DB search
MCRDGACGERNGEPSASEGNVAALEHSRAAQDRTAYHQDATVSEDLGLNAPLEEPAARCA
GQARLRGSRQVEEPRAVIVTVKLLGLRARDAGTVVKAARRIVAYVEGAPAAEPTKMRAAY
YGENGQSRGRARGSGGSLVGLRGPVSSEQLQQLLTGRHAATGSPLLTGTGSAGRVDRGTV
NLPAGQRWFTLTEAARIVGVDASYLRRLARQSSGAETGGPQRQRDAEPSEDAAPSTSREE
QHDDSPGEKTAARLAAERDPDSGRWRVARDELIRFVEQREPPTVVIGFDVVCAVPKSLSL
LWVFGDDELRRDIENSMNAAVDAVFTYLERHAAQGMVGSRNHPGLGLAAASYLHDVSRAD
EAHLHIHNIVANAVAIPVLDETGRPERDPVGGARVEWRALDSELFLAHARTAGFVGAAVL
RHELARRRGVTWAPVRNGVAELEDFPTELLAAFSTRHGQVQEELGQLVAQGMLSDGRTEA
AAQRRSRAAKKVLADAEVHAVQERRLTEAGWHPSQVRDLARRRDRVPVQPTAVDLAELAD
RLMGPQGLTAKAPTFDRRDVYREVAAWACDRLDAHAISTVVDQLLADPRIVRFEQHSARR
RHRGEETFSTEDLLDTEDSLLSLCRQGRVDRGGPPRTLIPPAAVEAALSGDGDGALGGIP
GVRLSGEQQDLVRRLLTDDDLVRLVVGPAGSGKTAAMRTVARVLAARGVTVLGAAHGGRQ
AEQLAATLEVETRVVSGWLTLLDHTEDPASYWPDDTVLIVDEASQVSTRDAERFLRYATR
TGTVVILVGDPAQLGSVGAGGWFAHLVTETTPPQLTGTHRQRGPGMAEVRAALAGLRSAL
PAEAMAAVSSLARSGHVRLFDDRAALLSTAVSDWYTERRQAGRATPMMAEHQRDVDALNT
AARDALTADGTLTGPVLTAAGREYQTGDEVITLTQAGHTLIPAGRPRGDYIRTGTIGRIV
AVRIDPSRPQHQSVTVRFPGKGTVDVGWDYLTHPFPDGRDGGLGHAYALTAHKAQGSTMS
TARPLIVDDTSRPGLYVMLSRAQQRLQAYLIRRPDLEADLDDEDWLPVLPIDSAVDRLAE
RLRTSRAERLAGDLDPIAQTAHRLGSSHSLAELLALDSPTGPRGSETERPGATVLRRAQI
AAQARVTAAAVAAPEPALLARIGPRPEAGPHRLLWDRAVSALATYRAAHAPAAPADDPGP
RPEPGHQDTGAQRWKRLRGQATMLADAWATRLSAGAARRFATGEEAVPRRRSVAGIHALL
DAGWDARDLLAKLGEQEQTTARTGASVLDHRVAVLCARARLDIAAFQLPAPQTAAEAWHA
ATTLLGSAESRYLATRPTADLAAEERLLGRVLRMTRNDDELRAHLLTRIRRMEADHSAAI
RRLDHDNGPSGVAAAEGSGPSAQTPPAVHRLRRAQAAHELRLRRTLLAAVDGDPAAHEVA
ARHQNRVNAALEHQIDEALLRIDQEPPRYLTDLMGSRPADAAGAARWRERARAVEDFRHR
ELGLAYGVLAAPSARTPSARALDVPPKQPELRVRYQALLSDPQQLDIDL
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
gtgtgccgtgacggagcctgcggggaaaggaacggggaaccatcggcctccgagggtaac
gtcgctgcgctcgaacattcccgagctgcccaggaccgcaccgcctaccaccaagacgcc
accgtttccgaggatctcgggctcaacgctccattggaagaacccgcagcccgttgcgcg
ggtcaagcccgactgcgggggagccggcaggtggaggagccacgtgcagtgatcgtcacg
gtgaagctgctgggattgcgagcccgcgacgccggaacggtggtgaaggccgcccgccgg
atcgtcgcctatgtcgaaggtgcccccgccgccgagccgacgaaaatgcgggcggcgtac
tacggagagaacggacaatcgcgggggcgcgctcgtggttctggcgggagcctggtcggc
ctacgcggtccggtgagttccgagcagctgcagcagctgctgaccggccggcacgcagcg
acgggtagcccgttgctaaccggaacgggctcggcggggcgcgttgaccgaggaaccgtc
aacctgccggccggtcaacggtggttcaccctgaccgaggcggcccggattgtcggtgtg
gatgcgtcctatcttcgccgactggcgcgccaaagctccggcgcggagacaggcggcccg
caacggcaacgtgatgccgagccgtcggaagatgcggcaccgagcacatccagagaggag
cagcatgatgactccccaggagagaaaactgctgcgcggttagccgcggagcgagaccct
gattccggtcggtggcgggtcgcgcgcgatgaactgatccgttttgtcgagcagcgggag
ccgcccacggtcgtgatcggattcgatgttgtctgtgccgtaccgaagagcctgagcctg
ctgtgggtcttcggggatgacgagcttcgacgagacatcgaaaattcgatgaacgctgct
gtcgacgcggtgttcacctacctggagaggcacgcggcacagggcatggtgggcagccgt
aatcatccgggtctcggcctggccgcggcttcctatctgcacgacgtgtcgcgggcggac
gaggcgcatctgcacatccacaacatcgtcgcgaacgcggtcgcgataccagtcctcgat
gaaaccggtcggccggagcgggacccggtgggcggagcacgggtggagtggcgggcgctg
gacagcgagctgttcctggcgcatgcgcgcacagccgggttcgtcggcgcggccgtgctt
cgccacgagctggcccgccgtcggggtgtcacgtgggcgccggtccgcaacggggtggcc
gagctggaggattttcccaccgagctgctggcggcgttctccacccgtcacgggcaggta
caggaggagctcggccagctggtggcccagggaatgctctcggacgggcggaccgaggcg
gcagcccagcggcggtcccgggccgcgaagaaggtgctggccgacgccgaggtgcacgcc
gtgcaggaacggcgcctgaccgaggccggttggcacccctctcaggtgcgggatctcgcc
cgccgccgcgaccgggtaccggtacagccgacggccgtggatctcgccgagctggcggac
cggctgatgggaccgcagggcctgacagcgaaggcgccgacgttcgaccggcgcgacgtc
taccgggaggtcgccgcctgggcatgcgaccggctcgacgcccacgcgatctccaccgtc
gtcgaccagctcctggccgatccgcggatcgtccggttcgagcagcattccgcgcgccgg
cggcaccgcggcgaggagacgttcagcactgaggatctcctcgacaccgaggacagcctg
ctcagcctgtgccgacagggccgcgtcgaccggggaggaccgccccgcacactcatccct
cccgccgcggtggaggcggcgttgtccggcgacggcgacggcgccctcggtggaataccg
ggagtgcggctgagcggtgaacagcaggacctcgtccgcagacttctcaccgacgacgat
ctggtccggctggtggtcggccctgccggatcaggcaagacggcggcgatgcggaccgtc
gcgcgggtgctggccgcgcggggcgtcaccgtcctcggagcggcccacggcggccgtcag
gccgaacagctcgcggccacgctggaggtggagacccgggtggtcagcgggtggctcacc
ctgcttgaccacaccgaggatcccgcctcgtactggccggacgacacggtcctgatcgtg
gacgaggcgagtcaggtctccacccgagacgccgagcggttcctgcgctacgccacccgc
accggcacggtcgtgatcctcgtgggcgatccggcgcagttggggagcgtcggcgcgggc
ggatggttcgcgcacctcgtcactgaaacgacgcccccgcagctcaccggcacccaccgc
caacgcggacccgggatggccgaggtccgcgcggcactggccggcctgcgctccgcgctg
ccggccgaggcgatggccgcggtcagttcgctggcccgctccggccacgtccgcctgttc
gacgaccgcgcggcgctgctcagcacggcggtctccgactggtacaccgagcgccggcag
gccggccgggccacgccgatgatggccgagcaccagcgcgacgtcgacgcgctcaacacc
gcggcccgtgacgcactgaccgcagacggcacgctgaccggtcccgttctcaccgcggcc
ggccgcgagtaccagaccggcgacgaagtgatcaccctcacgcaggccggccacaccctg
atccccgcaggccggccccgcggcgactacatccgtaccggaaccatcggccggatcgtc
gcggtgcgcatcgacccgtcccggccgcagcaccagtcggtaaccgtccgattccccggt
aagggaacggtggacgtcggctgggactacctcacccacccgttccccgacggccgggac
ggcggtctgggccacgcctacgcgctcaccgcgcacaaggctcaagggtcgacgatgtcg
acggcgcggccgctcatcgtcgacgacacctcccgtcctgggctgtacgtcatgctgtcg
cgcgcccagcagcgcctgcaggcctatctgatccgccgccccgacctcgaagccgacctg
gacgacgaggactggctccccgttctgccgatcgacagcgcggtcgatcggctggccgag
cggctgcgcacctcgcgcgccgagcggctcgcgggcgaccttgaccccatcgctcagacc
gcccaccgcctcggcagctcccacagcctggcagaactcctcgcgctcgacagccccacc
ggcccgcggggcagcgagaccgaacggccgggagccactgtgctgcgcagggctcagatc
gccgcacaggcccgggtcaccgctgcggctgtggcggctccggagccggctctgctcgcc
aggatcggcccgagaccggaagcaggaccgcaccggctgctgtgggacagggctgtcagc
gcgctcgccacctaccgggccgcccacgcgcccgccgcccccgccgacgacccgggccca
cggccggagcccggccaccaggacaccggcgcccaacgctggaaacgactacgcggccaa
gccaccatgctggccgacgcctgggccacccggctgtccgccggcgccgcccgccgcttc
gccactggtgaggaggccgtacctcgccgacggtcggtggcgggcatccacgcgttgctg
gacgccggctgggacgctcgcgatctcctggcgaagctcggcgaacaggagcagaccacc
gcgcgcaccggcgcctcggttctggaccatcgggtcgccgtcctctgcgcgcgggcccgg
ctggacatcgccgccttccagctccccgcaccgcagaccgcggccgaagcctggcacgcg
gcgaccacgctgctcggctccgcggagtccaggtatctcgcgacccgacccaccgccgac
cttgccgccgaggagcggctactgggccgcgttctccgcatgaccaggaacgacgacgag
ctccgcgcgcatctcctcacccgcatccgccggatggaggcggaccactccgcagccata
cggcgccttgaccacgacaacggaccatccggagtagcagccgccgaaggttctggcccg
tccgcgcagacacctcctgccgtacaccgcctccggcgggcgcaggcagcgcacgaacta
cggctccgtcgcaccctgctcgccgccgtcgacggcgacccggccgctcacgaagtggcc
gcgcggcatcagaaccgcgtcaacgctgccctggagcaccagattgatgaggcgctgctg
cgcatcgaccaggaaccgccgcgctatctcaccgacctgatgggatcccggcccgccgac
gccgccggtgcggcccgctggcgcgagcgtgcccgcgcggtggaggacttccggcaccgc
gagctcggcctagcctacggggtgctggccgcgccgtcggcaaggacgccttccgcgcga
gccctcgacgtgcctcccaaacaacctgagctgcgcgtccgctaccaggcgctcctgtcg
gacccccagcagctcgatatcgatctctga
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