Parafrankia sp. EAN1pec: Franean1_1547
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Entry
Franean1_1547 CDS
T00608
Name
(GenBank) protein of unknown function DUF470
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Franean1_1547
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fre01007
]
Franean1_1547
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fre03016
]
Franean1_1547
Enzymes [BR:
fre01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Franean1_1547
Amino acid related enzymes [BR:
fre01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Franean1_1547
Transfer RNA biogenesis [BR:
fre03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Franean1_1547
Prokaryotic type
Other AARSs
Franean1_1547
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2_TM
DUF6962
Senescence_reg
Motif
Other DBs
NCBI-ProteinID:
ABW10986
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All DBs
Position
complement(1848044..1850014)
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AA seq
656 aa
AA seq
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MAIASRSGPLPGPLTTSDRREPDGPGARGSGRRDDRRADRPRAADSTRPADGPRITRGPR
RADSPRRTEGPWRASGPRVAALVTLLLGLVDIAAVLTPGWHSRLEALRELLPAAASRQAA
AFTVVVGMLLVLLSAGLRRRKRRAWRAVVILLGSSVILHLARGLDYEEAAGSAALCVALL
LAHRQFQAKGDPTTRWRAAGVGLLLTVVSIGVGLLLLNLRGSRIAGPHPLSAELEQIVLG
LVGIPGPLGFSSARFADLANRMLLTMGVLTIGSTAYLALRPPEPRPRLTDADEARVRDLL
AGHGCADSLGYFALRSDKSVIWSPTGKSCVAYRVVSGVMLASGDPLGDREAWPGAIREFL
REAADHAWTPAVIGCSEAGGTAWTRAGLSVLEFGDEAVVETAGFTLEGRTMRNVRQAVAR
VERAGYTVDIRRVRDLTPQDVDRLKAQAAAWRGTETERGFSMALGRIGGASDGDCVAVMA
FSTDPDGADPDGPNPDSAGPDSAEPRLRALLHFVPWGRTGLSLDAMIRDRTADNGLNEFL
IVSALRQAGDLGVERLSLNFAFFRSALERGERLGAGPVIRHWRGLLMFFSRWFQIDSLYR
FNAKFQPVWLPRYVCYPTSAELPRITLAMLRAEAFLVRPRWCSRLPRPSRPARRPG
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
gtggccatcgcgagcagatcgggcccactgccgggcccgttgacgacgtcggaccgccgg
gagccagacggcccgggcgcccgcggtagtggtcggcgggatgaccggcgcgccgacaga
ccgcgggccgccgacagcactcggccggccgacggcccacggatcacccgcgggccgcgg
cgtgccgacagcccgcggcgtaccgaaggcccatggcgtgccagcgggccacgggtcgcc
gcgctggtgacactgctgctcggcctcgtggacatcgcggccgtgttgacgccggggtgg
cactcgcggctggaggcgctgcgggagctgctgcccgccgccgcctcccggcaggccgcc
gcgttcaccgtcgtggtcggaatgctgctggtgctgctctcggccgggctccggcggcgc
aaacggcgagcgtggcgagccgtcgtgatactcctcggctcgagcgtgatcctgcacctc
gcccgggggctggactacgaggaggctgccgggtcggccgcgctgtgcgtcgccctgctg
ctggcccacaggcagttccaggccaagggcgatccgacgacgcgctggcgggcggccggc
gtggggctcctgctcacggtcgtctcgatcggggtcggcctgctgctgctgaacctgcgc
ggcagtcggatcgccggcccccatccactgtccgcggagctggagcagattgtcctgggg
ctggtcggcattccgggcccgctggggttcagctccgcccgcttcgccgacctggccaac
cggatgctgctgacgatgggtgtactgaccatcgggtccaccgcctatctggcgcttcgc
ccgcccgagccacggccgagactgaccgacgcggacgaggcccgggtgcgggacctgctg
gccggtcacggctgcgccgattcgctcgggtatttcgcgctgagatccgacaagtcggtg
atctggtcgccgaccgggaagtcctgtgtggcctaccgcgtggtctccggggtgatgctc
gccagcggcgatccgctgggtgaccgggaggcgtggccaggcgccatcagggagttcctg
cgcgaggcggccgaccacgcctggacgcccgcggtgatcggctgctcggaggcgggcgga
accgcctggaccagggccggcctgtccgttctcgagttcggcgacgaggccgtcgtcgag
acggccggtttcaccctggagggccggacgatgcgtaacgtccggcaggccgtcgcccga
gtcgaacgcgccggctacacggtggacatccgacgagttcgcgacctgacgccgcaggat
gtcgaccgtctcaaggcacaggccgcggcctggcggggcaccgagaccgagcggggattc
tccatggcgctcggccggatcggcggtgcgtcggacggcgactgcgtcgccgtgatggct
ttctccacggacccggacggcgcggacccggacggcccgaacccggacagcgcgggcccg
gacagcgccgagccgcggctgcgcgcgctgttgcacttcgtgccgtggggacggacggga
ctttcactggatgcgatgatccgtgaccggacggcggacaacgggctgaacgagttcctg
atagtcagtgccctgcgtcaggccggcgacctcggggtcgagaggctgtccctcaacttc
gcgttcttccggtccgcgctcgaacgcggtgagcgcctcggcgccgggccggtgatccgt
cactggcgcggcctgctgatgttcttctcccgctggttccagatcgacagcctgtaccgg
ttcaacgcgaagttccaacctgtgtggctgccccgctacgtctgctatccgacgtccgcg
gagctgccccggatcacgctggcgatgctcagggctgaggccttcctcgtccggccacgc
tggtgctcccgcctcccccggccctcccggcctgccaggcgcccggggtga
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