Parafrankia sp. EAN1pec: Franean1_1813
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Entry
Franean1_1813 CDS
T00608
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre03030
DNA replication
fre03430
Mismatch repair
fre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Franean1_1813
03430 Mismatch repair
Franean1_1813
03440 Homologous recombination
Franean1_1813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fre03032
]
Franean1_1813
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_1813
Enzymes [BR:
fre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Franean1_1813
DNA replication proteins [BR:
fre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Franean1_1813
DNA repair and recombination proteins [BR:
fre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Franean1_1813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
UVR
GIY-YIG
DEDDh_C
TMV_coat
DUF1604
MORN
Motif
Other DBs
NCBI-ProteinID:
ABW11251
LinkDB
All DBs
Position
complement(2176173..2177984)
Genome browser
AA seq
603 aa
AA seq
DB search
MCPVPAPTGGVPRQASLAELGRPLSDLTFVVVDLETTGGSPATSEITEIGAVRVRGGQIL
GEMSSLVRPSAPIPAFISVLTGITGAMVATAPGIGEVVPTFLEFARGAVLVAHNAPFDLG
FLRAAATACGYPAPAWEHLDTVRIARRVISRDETRDCRLSSLAALFGSATQPNHRALADA
RATVDVLHGLFERLGNLGVTTIEDLHEYSARVSPAQRRKRHLADDLPTGPGVYVFRDGTG
RPLYVGTSRSVRSRVRTYFTASEPRTRMAEMVAIAERVDAIECAHALEAEVRELRLIAEY
KPPYNRRSRFPERAVYLRLTDEPFPRLSRVRSVGDGVTSLGPFGSAAAAESAATALLEAI
PLRQCSTRLSPRRPTAACALAELGRCGAPCDGREGVAEYGQHVATARGAMTADPRPVVDV
LERRIARLSADQRYEEAAGVRDRLAAYVRAVARMQRLTALTCIDELVAAAPTADAGWDLA
VVRRGRLVSAASVPRGTDPRPWVDAVVASAETVRPLPGPTPCASVEETERIGRWLAGPGV
RLVRLDGEWSWPAHGAIRAARRFDVRFDGGLDGGFDRGFDSPTDTRRGRAPSNPRSGREP
RKR
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
gtgtgcccagtccctgcgccgaccggcggcgtgccgcgccaggccagcctggcagagctc
ggccggccgctgtcggacctgacgttcgtcgtcgtcgacctggagaccaccggcggctcg
ccggcgacgagcgagatcaccgagatcggcgccgtgcgggttcggggcggccagatcctc
ggtgagatgtcgagcctggtccggccgtcggcccccatcccggccttcatctccgtgctc
accggcatcaccggcgccatggtcgccaccgccccgggcatcggcgaggtcgtgccgacg
ttcctggagttcgcccggggcgcggtgctcgtggctcacaacgccccgttcgacctcggc
ttcctgcgcgccgccgccacggcgtgcggctacccggccccggcctgggaacatctcgac
acggtgcggatcgcgcgccgcgtcatcagccgcgacgagacccgcgactgccgcctgtcc
tccctggcggccctcttcggtagcgcgacccagccgaaccaccgggcgctggccgatgcc
cgcgcgacggtcgacgtcctgcacgggctgttcgagcggctgggcaacctgggtgtcacc
acgatcgaggatctgcacgagtacagcgcgcgggtctcccccgcccagcggcgcaagcgg
cacctcgccgacgacctgcccaccggcccgggggtctacgtgttccgcgacggcacgggg
cgcccgctgtacgtcggcacgtcccggtcggtccgctcccgggtgcgtacctacttcacg
gccagcgagccccgcacccggatggcggagatggtcgcgatcgccgagcgggtcgacgcg
atcgagtgcgcgcacgcgctcgaggcggaggtgcgcgagctgcggctgatcgccgagtac
aaaccgccgtacaaccgccgctcccggttccccgagcgggccgtctacctgcggctcacc
gacgagccgttcccccggctctcccgggtccgctccgtcggcgacggtgtgacgtcgctg
gggccgttcggcagcgcggcggcggccgagtcggcggccacggcgctgctggaggcgatc
ccgctgcgccagtgctcgacccggctctcgccgcgccgtccgacggccgcgtgcgcgctg
gccgagctggggcgctgcggcgcgccgtgcgacggccgggagggggtcgccgagtacggc
caacacgtcgccacggcgcgcggcgcgatgaccgccgatccgcgtcccgtcgtggacgtg
ctggagcggcgcatcgcgcggctgtccgccgaccagcgctatgaggaggccgccggggtc
cgcgaccggctcgcggcctacgtgcgggccgtcgcgcgcatgcagcggctgacggcgctg
acctgcatcgacgagttggtcgccgccgcgccgaccgccgacgccgggtgggatctcgcc
gtcgtccgccgtggccggctggtgtccgcggcgtcggtgccgcgcggcaccgacccgagg
ccctgggtcgacgccgtggtcgccagcgcggagaccgtccgaccactgcccggccccacc
ccgtgcgcctcggtcgaggagacggaacggatcgggcggtggctggccgggcccggcgtg
cgcctggtccggctggacggcgagtggagctggccggcgcacggcgcgatccgcgcggcg
cggcggttcgacgtccgcttcgacggcggtttggacggcgggttcgaccgcgggttcgac
tcccccaccgacacccgacgcgggcgcgcgcccagcaacccccggagcggccgcgagccg
cggaaacgctag
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