Parafrankia sp. EAN1pec: Franean1_1926
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Entry
Franean1_1926 CDS
T00608
Name
(GenBank) ABC transporter related
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_1926
Transporters [BR:
fre02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Franean1_1926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
AAA_22
AAA_16
nSTAND3
Zeta_toxin
DEAD
AAA_30
AAA_24
AAA_29
NACHT
AAA_18
AAA_7
ORC-CDC6-like
AAA_5
Motif
Other DBs
NCBI-ProteinID:
ABW11363
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All DBs
Position
2308075..2309841
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AA seq
588 aa
AA seq
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MSSDGLWATGGRLRRLVPELTAGIAGTLALAVTATVGKVVIPVVVQQTLDRGVWEGGADL
GLVGVSVALAAVAILITALAAFRMNVRLYRVSESALATLRVRAFRHVHDLSMLSQSAQRR
GSLTSRVTSDIDTMSQFLQFGGVMLIVATGQMLIATILMFVYSWQLALLVYAFFVPLVIA
TRRFQKRLAVRYGKVRERVGDMLGAISESVVGAQVVRAYGAQDRTSRRIDGTVEDYRAAQ
THAQTLVAGVFAGVETVAALTTAGVVIVGVAIGVDGSLTTGQLVAFLFLLTLFVMPIQSL
TEVLNDGANAFAGLRRVLDVLDTPSDVRDPAEDTGGVALPDGPLGVRFDHVGFAYPGGPP
VLHDVTLDLASHRRVAVVGETGSGKTTMAKLLTRLMDPTDGTVLIGGVPLNQVRFDSLRG
RVVMVPQDGFLFDLTVAGNVRYGRPDASDAEIVNAFAQLGLGDWLAGLPAGIATPVGERG
ELLSAGERQLVALARAQLADPDLLVLDEATSAVDPATEVKIATALLELTRGRTSVTIAHR
LSTAEAADEVVVVDAGRVVQRGTHMELVAVPGVYRRLHESWAAGVSSH
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgagctccgacggcctgtgggcgaccgggggccggctgcgccggctcgtgccggagctg
accgccggcatcgccggaaccctggccctcgccgtgaccgccaccgtgggcaaggtggtg
atccccgtcgtggtccagcagacgctcgaccgcggtgtctgggagggcggagcggacctc
ggcctcgtcggagtctcggtggccctcgccgcggtcgccatcctgatcaccgcactcgcg
gcgttccggatgaacgtgcggctctaccgcgtctccgagagcgcgctggccaccctgcgc
gtccgggccttccgccacgtccacgacctgtcgatgctgagccagtccgcgcagcggcgc
ggctcgctgacctcccgggtcaccagtgacatcgacacgatgtcgcagttcctccagttc
ggcggcgtcatgctgatcgtcgccaccgggcagatgctgatcgccacgatcctcatgttc
gtctactcctggcagctggccctgctggtgtacgcgttcttcgtcccgctggtcatcgcc
acccggcgtttccagaagcggctggcggtgcggtacgggaaggtgcgggagcgggtcggg
gacatgctcggcgcgatctcggagtcggtggtcggcgcccaggtcgtgcgggcctacggc
gcgcaggaccgcacctcccggcgcatcgacggcacggtggaggactaccgcgccgcacag
acccacgcccagaccctggtggcgggggtgttcgccggagtcgagacggtcgccgcgctc
accaccgcgggggtggtgatcgtcggggtcgcgatcggcgtcgacgggtcgctgaccacc
gggcagctggtggccttcctgttcctcctcacgctgtttgtgatgcccatccagtcactg
accgaggtactgaacgacggcgcgaacgccttcgccgggctgcggcgggtcctcgacgtc
ctcgacaccccgtcggacgtccgcgacccggccgaggacaccggtggcgtggcgctgcca
gacgggccgctcggcgtgcggttcgaccatgtcggattcgcctacccgggcggcccgccg
gtgctccacgacgtgacgctcgacctcgcgtcgcaccggcgggtggccgtcgtcggggag
accggctccggcaagacgacgatggcgaagctgctcacccggctcatggaccccaccgac
ggcaccgtgctgatcggcggcgtcccgctgaaccaggtgcggttcgactcgctgcggggc
cgggtggtcatggtgccgcaggacgggttcctgttcgacctcaccgtcgccggcaacgtc
cggtacgggcggccggacgcctccgacgccgagatcgtgaacgccttcgcgcagctcggc
ctgggcgactggctcgccggcctgcccgccggcatcgccaccccggtgggggaacgcggc
gagttgctctccgccggcgaacgccagctcgtggcgcttgcccgtgcccaactcgccgac
cccgacctgctcgtcctcgacgaggcgacctccgccgtcgatccggcgaccgaagtgaag
atcgccacggccctgctcgagctcaccaggggacgcacctccgtcaccatcgcgcaccgg
ctctccaccgcggaggccgccgacgaggtcgtcgtggtcgacgccgggcgggtcgtccag
cgcgggacgcacatggagctggtcgccgtgcccggggtctaccggcggctgcacgaatcc
tgggcggccggggtctcgtcgcactga
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