Parafrankia sp. EAN1pec: Franean1_2118
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Entry
Franean1_2118 CDS
T00608
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Franean1_2118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_2118
DNA repair and recombination proteins [BR:
fre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Franean1_2118
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Franean1_2118
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Anti-TRAP
Motif
Other DBs
NCBI-ProteinID:
ABW11554
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Position
2543854..2544642
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AA seq
262 aa
AA seq
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MPRGRRPTCSGGRACNHGNVPVYRDEGVVLRTAPFAEADRVVTVLTRRNGRVRAVARGVR
RTSSRFGARLEPGTHVDLQLHEGRSLDTVTQADILGAYGATIAQEYARYTAAAVMLETAE
RLTSEERQPALRLFLLLVGGLRTLAGGERPPSLVLDAFLLRSLAVSGYGMALDECALCGE
PGPHHSLSVPGGGVVCPECRPRGAASTSPAAVRLLADLLHGDWDGAEASDARVRREAGGI
VAAYLQWHLERALRALPHLERT
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtgccccgcgggcggcggcccacctgttcggggggacgggcgtgcaaccatgggaacgtg
ccggtgtatcgcgatgaaggcgtcgtcctgaggacggcgcccttcgccgaggccgaccgc
gtcgtcacggtgctcacccggcgtaacggccgggtccgcgcggtggcccggggggtgcgt
cggacgtcctcgcggttcggtgcccggctggagcccggcacccacgtcgatctccaactg
cacgagggtcggtcgctggacacggtgacccaggcggacattctcggtgcctacggtgcg
acgatcgcgcaggaatacgcgcgatacacggcggccgcggtgatgctggagacggccgag
cgcctgaccagcgaagaacgccagcccgccctacggctgttcctgctgctcgtcggcggc
ctgcgtaccctggcgggcggtgagcgtccgccgtcgctggtcctggacgccttcctgctg
cgctccctggcggtctcggggtacggcatggccctcgacgagtgcgccctgtgtggggag
ccgggaccgcaccactcgctgtccgttcccggcggcggcgtagtgtgcccggaatgtcga
ccgcggggtgcggcgtcgacgtctccggccgcggtgcggctgcttgccgacctcctgcac
ggtgactgggacggcgccgaggcgagcgatgcccgcgtccggcgggaggccggcggcatc
gtggccgcctacctgcagtggcatctcgagcgggcgctgcgcgcccttccgcatctcgaa
cggacgtga
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