Parafrankia sp. EAN1pec: Franean1_2376
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Entry
Franean1_2376 CDS
T00608
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre03030
DNA replication
fre03430
Mismatch repair
fre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Franean1_2376
03430 Mismatch repair
Franean1_2376
03440 Homologous recombination
Franean1_2376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fre03032
]
Franean1_2376
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_2376
Enzymes [BR:
fre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Franean1_2376
DNA replication proteins [BR:
fre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Franean1_2376
DNA repair and recombination proteins [BR:
fre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Franean1_2376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
MCM10_OB
Motif
Other DBs
NCBI-ProteinID:
ABW11808
LinkDB
All DBs
Position
complement(2824105..2827641)
Genome browser
AA seq
1178 aa
AA seq
DB search
MPNSFVHLHVHTEYSMLDGAARLKDMFNEVSRQGMPAVAITDHGYMYGAYDFYKQATAAG
VKPIIGCEAYVAPESRLLKQRVRWGEPHQKSDDVSGGGSYTHMTIWARNAEGLHNLFRLN
SRASIEGHYIKWPRMDQEIISEHAAGLMATTGCPSGEVQTRLRLGQYDAALKAAATYQEI
YGRDNYYCEIMDHGIEIERRVRDGLVDIARALDMRFVVTNDSHYTYESERTTHAALLCVQ
TASTVANPSFQFEGSGYFLKSAEQMYAIDTSDAWQQGCETTLMIAERVDPAGMFTKQNLM
PRFPVPEGETDESWFRKETWAGMARRFPDGFDEEHRARVEYELGVILAMGFPSYFLVVAD
FIMWAKSQGIPVGPGRGSAAGSMVAFALGITDLDPIPHSLLFERFLNPDRVSMPDIDIDF
DERRRGDVIRYVTEKWGDDRIAQIVTYGTIKAKAAIKDSSRVLGYPYAVGDRITKAMPPA
VMGKDIPLGGIFDPKHPRYSEAGEIRGLYESDADVRKVIDTAKGLEGLIRQAGVHAAGVI
MSAEPIIDHIPVWRRDADGAIITQFDYPTCENLGLLKMDFLGLRNLTVMDDAVRNVEANR
GFKIDLMGLELNDAASYELLARGDTLGVFQLDGGPMRSLLRMMRPDNFEDISAVLALYRP
GPMGANSHINYALRKNGQQEITPIHPELAEPLADILDTTHGLIVYQEQVMAIAQKVAGYT
LGQADLLRRAMGKKKKEILDKEFVPFSDGMKSSGFSEAAIKTLWDILVPFSDYAFNKAHT
AGYGLVSYWTAYLKANFPAEYMAALLTSVRDDKDKSAIYLNECRRMGIRVLPPDVNTSDA
DYTAHGDNEIRVGLAAIRNVGINVVESIVRNRKTKSRFTSFPDFLDKVDAVACNKRTVES
LIKAGAFDALGHTRRGLVEKHEQAVDAVMGVKKKNAEGQFDLFAFDGEDAEEDTAPIFGV
QEFSDQEWDKSVLLSHEREMLGLYVSDHPLLGVEHILAAKADCGIASLNGGDYPDGSVVT
IGGIISSLQRKVTKQGKLWALATVEDLEGGLEVMFFPATYETCSTQLAEDAVVIVKGRVD
KREDTPRLVASDLTVPDLSEHSLSPPVVITLPASRVNPPTVDRLREVLGDHPGTTEVHLR
LQSASRTTLLRLDDAYKVQRTAALMGDLKALLGASAVA
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgccgaactctttcgtccaccttcacgttcacaccgagtactcgatgctcgacggtgcg
gcacgactcaaggacatgttcaacgaggtctcgcggcagggcatgcccgccgtggcgatc
accgaccacggctacatgtacggggcgtacgacttctacaagcaggcgaccgcggcgggc
gtgaaaccgatcatcggctgcgaggcatacgtcgcgccggaatcacggctgctcaagcag
cgcgtccgctggggcgagccgcaccagaagagcgacgacgtctccggtggtggctcctac
acccacatgacgatatgggcgcggaacgccgagggcctgcacaaccttttccggctcaat
tcccgggcgtccatcgagggccattacatcaagtggccacgcatggaccaggagatcatc
tccgagcacgccgcgggcctgatggcgacgaccgggtgcccgtccggagaggtccagacg
aggctgcggctcggccagtacgacgccgcgctgaaggccgccgcgacttaccaggagatc
tacggccgcgacaactactactgcgagatcatggaccacggcatcgagatcgagcgccgg
gtccgtgacgggctggtcgacatcgcccgcgcgctcgacatgcgtttcgtggtcaccaac
gactcgcactacacctacgagtccgagcggacgacccacgccgcgctgctgtgcgtccag
accgcctcgacggtggcgaacccgtccttccagttcgagggctcgggctacttcctgaag
agcgccgagcagatgtacgcgatcgacacgtccgacgcctggcagcagggctgcgagacg
acgctgatgatcgccgagcgggtcgacccggccggcatgttcaccaagcagaacctgatg
ccgcgcttccccgtccccgagggggagaccgacgagtcgtggttccgcaaggagacctgg
gcgggcatggcccgccgcttccccgacgggttcgacgaggagcaccgcgcccgggtcgag
tacgagctcggggtcatcctcgcgatgggcttcccgtcctacttcctggtggtcgccgac
ttcatcatgtgggcgaagagccagggaatcccggtcggccccgggcgcgggagcgcggcg
ggctccatggtcgccttcgccctgggcatcaccgacctcgaccccatcccgcacagcctg
ctgttcgagcggttcctcaaccccgaccgcgtctcgatgccggatatcgacatcgacttc
gacgaacgtcggcgcggtgacgtgatccgctacgtcaccgagaagtggggcgacgaccgc
atcgcccagatcgtcacctacggcaccatcaaggcgaaggccgccatcaaggactcctcc
cgggtcctcggctacccctacgcggtgggcgaccggatcaccaaggcgatgccgccggcc
gtcatgggcaaggacatcccactcggcgggatcttcgatcccaagcacccccgctacagc
gaggccggcgagatccggggtctctacgagtccgacgcggacgtccgcaaggtcatcgac
acggcgaagggcctggaggggctcatccgccaggcgggcgtgcacgccgccggtgtgatc
atgtcagctgaaccgatcatcgaccacatcccggtgtggcgccgcgacgccgacggcgcg
atcatcacgcagttcgactacccgacctgcgagaacctcggcctgctgaagatggacttc
ctcggcctgcgcaacctcaccgtgatggacgacgcggtgcgcaacgtggaggcgaaccgc
ggcttcaagatcgacctgatgggcctggagctcaacgacgccgcgtcctacgagctgctc
gcccgcggcgacaccctcggggtgttccagctcgacggcgggccgatgcgctcactgctg
cggatgatgcgcccggacaacttcgaggacatctccgccgtcctcgcgctgtaccggccg
gggccgatgggcgccaactcgcacatcaactacgcgctgcgcaagaacggccagcaggag
atcaccccgatccatcccgagctcgccgagccgctggccgacatcctggacaccacccac
ggcctgatcgtgtaccaggagcaggtcatggccatcgcgcagaaggtcgccggctacacg
ctcggccaggccgacctgctgcgccgcgcgatgggcaagaagaagaaggagatcctcgac
aaggagttcgtgccgttctccgacggcatgaagtccagcgggttctccgaggccgccatc
aagaccctgtgggacattctcgtccccttctccgactacgccttcaacaaggcgcacacc
gccggctacggcctggtctcctactggacggcctacctcaaggcgaacttcccggccgag
tacatggcggcgctcctgacctcggtacgcgacgacaaagacaaaagcgcgatctacctc
aacgagtgccggcggatgggaatccgcgtcctgccgccggacgtgaacacctccgacgcc
gactacaccgcgcacggcgacaacgagatcagggtcggcctcgccgcgatccgcaacgtc
ggaatcaacgtcgtcgagtcgatcgtgcgcaaccggaagacgaagagccggttcacctcg
ttccccgacttcctcgacaaggtcgacgccgtcgcctgcaacaagcgcacggtcgagtca
ctcatcaaggccggtgcgttcgacgccctcggccacacccgccgcggcctggtggagaaa
cacgaacaggccgtcgacgcggtgatgggcgtgaagaagaagaacgccgagggtcagttc
gacctcttcgccttcgacggcgaggacgccgaggaggacaccgcccccatcttcggcgtg
caggagttctccgaccaggaatgggacaagtccgtactgctctcccacgagcgggagatg
ctcgggctctacgtctcggaccatccgctgctcggggtcgagcacatcctcgcggcgaag
gccgactgcggcatcgcctccctcaacggcggcgactacccggacggctcggtcgtcacc
atcggcgggatcatctccagcctgcaacgcaaggtgaccaagcaggggaagctgtgggcc
ctggccaccgtggaggacctcgagggcggcctggaggtcatgttcttcccggcgacctac
gagacctgctcgacccagctcgccgaggacgcggtcgtcatcgtcaaggggcgggtcgac
aagcgggaggacaccccgcgcctggtcgcctcggatctgaccgtgcccgacctcagcgag
cactccctgagcccgccggtggtgatcaccctgccggcgtcgcgggtcaacccgcccacc
gtcgatcggctgcgcgaggtgctcggtgaccaccccggcaccaccgaggtccacctgcgc
ctgcagtcggcgagccgcacgaccctgctccggctcgacgacgcttacaaggtgcagcgg
acggccgcgctgatgggtgacctcaaggccctgctaggggcctccgccgtcgcctga
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