Parafrankia sp. EAN1pec: Franean1_2981
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Entry
Franean1_2981 CDS
T00608
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Franean1_2981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_2981
Transporters [BR:
fre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Franean1_2981
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABW12399
LinkDB
All DBs
Position
3506257..3507840
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AA seq
527 aa
AA seq
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MIRGARLGAVAVTCCAALVLAACGGGESDGSSRTSENGASGATGNPVPGGEGRILLLSEP
RSLDPAALNNVYAAGAAVGNALYGTLMTNNEAGEIQYSMAESFTTPDNGATFELKLRPGL
AFSDGTALTAEAVKYNWDRIKDPKLGAFSRAEAAMIASSEVEDETTLKVTMVAPVPKYAQ
AIVTSTLNWIAEPAALEKGQQKFDTQPIGAGPFTLSKWTRQAEMELVRNTRYWDAPKPYL
DRLSLRPATDSSQRYNTVLTGGADLAVESSWVNLDKAKQARLSTNVMQLSGGIFIALNLR
SEPFSDIRARQALAAAIDIETLNLAAYSGTAEAADTLFSKISPYHSDVPLHTTDHDKAQR
LFDELAGEGKPVTFTFKTPPTTENRAVAENIQTQLSTFRNVKAEVKVIEVAEFSQLRTTH
DFDAAASSALFQDPDPRLTTTFAGDSPANLTGIDDAVLNESLQAGRVARTEAEAKDAYVT
VQERLAVVTPVIFTVRAAPSTISSPNVGGIVQYGIGSLLPSELWIKP
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgattcgtggagcacgattaggcgccgtggcggtcacctgctgcgccgcgcttgtcctc
gccgcctgtggaggcggcgagtcagacggttcctcaaggacctccgagaacggggcctcc
ggcgcgaccggcaacccggtgcccggcggcgaagggcggatcctcctgctgagcgagccg
cgcagcctcgacccggcggcgctcaacaacgtgtacgcggccggcgctgccgtcggcaac
gccctgtacggcacgctgatgaccaacaacgaggccggcgagatccaatactcgatggcc
gagtccttcaccacgccggacaacggcgccaccttcgagctgaagctccggccggggctg
gccttctcggacggcaccgcgctgaccgccgaggccgtcaaatacaactgggaccggatc
aaggaccccaagctgggcgctttcagccgggccgaggcagcgatgatcgcctcgtctgag
gtggaggacgagaccactctcaaggtcaccatggtcgcgccggtaccgaagtacgcccag
gccatcgtcacctcgacgctcaactggatcgcggagcccgccgctctggagaaagggcag
cagaaatttgacacccagccgatcggcgccggccccttcacgctgagtaaatggacacgc
caggccgagatggagctcgtcaggaacacccgctactgggatgctcccaagccctacctc
gaccgtctttctttgcggccggcgaccgacagtagtcagcgctacaacaccgtgctcacg
ggaggtgcggacctcgccgtagaatccagctgggtcaacctggacaaagcgaagcaggcc
cgactctcgacgaacgtgatgcagctcagtggcgggatattcatcgccctgaacctgcgc
agcgaaccattctccgatattcgcgcccggcaggccctcgcagccgcgatcgacatcgag
acactgaacctcgccgcttacagcggcaccgccgaggcggccgatacccttttcagtaaa
atttctccgtatcattctgatgtcccgctgcacaccaccgaccacgacaaggcccagcgc
ctgttcgacgaactggccggtgagggaaagccggtcaccttcaccttcaaaacacctccg
acgaccgagaacagggcggtcgcggaaaacatccaaacccagctcagcaccttcaggaac
gtgaaagccgaagtcaaggtcatcgaggtcgcggagttctctcagctgcgcacaactcat
gacttcgacgcggcggcctcctcggcgctgttccaggaccctgacccgcggctgaccacc
acgttcgccggcgactcgccggccaacctgaccggcatcgacgacgcggtactgaacgag
agcctgcaggccggccgggtcgcgcggaccgaggcggaagccaaggacgcctatgtgacc
gtgcaggaacgcctggcggtggtcactccagtgatcttcaccgtgcgggcggcacccagc
accatctcgagccccaacgtgggcggcatcgtccagtacggcatcggctcgctgctcccc
agcgagctgtggatcaagccctag
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