Parafrankia sp. EAN1pec: Franean1_3257
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Entry
Franean1_3257 CDS
T00608
Name
(GenBank) glycoside hydrolase family 2 TIM barrel
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00052
Galactose metabolism
fre00511
Other glycan degradation
fre00600
Sphingolipid metabolism
fre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
Franean1_3257
09103 Lipid metabolism
00600 Sphingolipid metabolism
Franean1_3257
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
Franean1_3257
Enzymes [BR:
fre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
Franean1_3257
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
ABW12663
LinkDB
All DBs
Position
complement(3854969..3858022)
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AA seq
1017 aa
AA seq
DB search
MTGTDFTAVPWEDSGFQALGRLPMHSIRRPAEVELDGVWDFQLLDSPTAPPGAEWKRADV
PGLWTMSEAGDPAHYTNVRMPFDETPPRIPARNPTGVYRRSFELRPAAGRRAILHVGAAE
GLLRVFVNGRAIGVSTDSHLAAEFDITEACVAGGRDRHTVELVISKWSSVSYLEDQDHWW
QSGITRSVYVYTLPEIRLADLAVVADFDPEARRGTLRLEVSTAGLDHLPELAWTVRVDVL
GRRSTLPVTPCSPAPGLPPPWDDRSVRPEPRVPADFMSLVSQIAADAPIPPRWSAAVPSL
RRSLAPRRPAGTATLHLDGLEVEPWSAESPHLEDLVVALVSPGGEVVDETRTRIGFRRVR
IEGRDLLVNGGRILIQGVNRHDTDARTGRVLSARTMLAELSLLKRFNVNAIRTSHYPNDP
RLLELCDELGFYVVDEADIEAHAFANAICDDPRYLPAFLDRVSRMTLRDRNHPSVIVWSL
GNETGYGANHDAAAGWLRRFDPTRPLHYEGAIALDWHGGRAATDIVCPMYPSFEALAAFS
ADPRADRPVILCEYAYSQGNSTGGLAEYWEMFETLPGLQGGFIWEFKDHSLDPAGDGGYR
YGGDFGDVPHDGATLVNGIVFPDLTPQPALYEARGLFSPVRIVSDAAAALAGAIGIRNRQ
SFNDLSAYVLELQVENDRSTDPVTVDVPDVAPGATGTIELPDPIRKLLGSAPPLALTLTV
RTRQGARWAPAGTVVAAHQITFPRPPVALLSAPVPDALRVDQDGSVVHPLLRRAPALCLW
RAVTDNDKSFSLDQRFVRSGFFRLTPGAVTAEADGGSLTITTAYATAFGTEVTHRRVISA
LAEHDYRFDEHVQLPADTEDALRVGVEFELTPGFDDARWVGLGPWENYPDRRSSALLGSW
RERIDDLAVPYLVPQENGGRGAVSELCLSGPAGTVRTFHPTPVQMAVGRHRVDQLEAAAH
WWELPPSDVTVVHLDVAHRGVGTAQLGPDTRPRHRLTDHEYTWTWRLRLESAAGAAV
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgactgggaccgacttcaccgcagtgccgtgggaggacagcggcttccaggccctgggt
cggctgccgatgcattcgatcaggcgacccgccgaggtcgagctggacggggtgtgggac
ttccagttgctggacagcccgaccgcgccccccggtgcggagtggaagcgcgccgacgtc
cccggcctctggacgatgagcgaggccggcgacccggcgcactacacgaatgtccggatg
ccgttcgacgagacgcccccgcgcatcccggcgcgcaaccccaccggggtctaccggcgt
tccttcgagctgcgccccgccgcgggccgccgggcgatcctgcatgtcggggcggcggag
ggcctgctgcgggtgttcgtgaacgggcgcgcgatcggcgtctccactgactcgcatctc
gccgccgagttcgacatcaccgaggcctgtgtcgccggcggacgggaccggcacacggtg
gagctggtgatctccaagtggtcgtcggtctcctatctcgaggaccaggatcactggtgg
cagtcgggtatcacccggtcggtgtacgtctacacgctcccggagatccggctggccgac
ctggctgtcgtcgccgacttcgatcccgaggcgcgtcgcgggacgctgcgcctggaggtg
tcgaccgccggtctcgaccacctgccggaactcgcgtggaccgtgcgggtcgacgtcctg
gggcgccgatcgacgctgccggtcaccccctgctccccggctccgggactcccaccgccc
tgggacgaccggtcggtccggcccgagccccgcgtcccggccgacttcatgagcctggtc
tcccagatagccgcggacgccccgatcccgccgaggtggtcggcggcggttccgtccctg
agacgcagcctcgcgccccggcggcctgccggcaccgccacgctccacctcgacggcctc
gaggtggagccgtggtcggccgagtctccccatctggaggatctcgtcgtcgcgctcgtc
tcccccggcggcgaggtcgtggacgagacccgcaccaggatcggcttccggcgggtccgg
atcgagggccgggatctgctggtcaacggcggacggatcctcatccagggggtgaaccgc
cacgacacggacgcccgcaccggccgggttctctcggcgcggacgatgctcgcggagctc
tccctgctcaaacggttcaacgtgaacgcgatccgcacctcgcactatcccaacgacccg
cgcctgctggagctgtgtgacgagctcggcttctacgtcgtcgacgaggcggacatcgag
gcgcacgccttcgccaacgcgatctgcgacgatccgcgctacctgccggctttcctcgac
cgggtgtcgcggatgacgctgcgcgaccgcaaccatccgagcgtgatcgtctggtcgctc
ggcaacgagacgggctacggagcgaaccacgacgccgccgccggatggctgcgccgcttc
gacccgacccgccccctgcactacgagggggcgatcgccctcgactggcacggcggccgg
gccgcgaccgacatcgtctgcccgatgtacccctcgttcgaggcgctggccgccttctcc
gccgatccgcgggccgaccgtccggtgatcctgtgcgagtacgcctactcgcaggggaac
tcgaccggagggctggccgagtactgggagatgttcgagacgctgcccggcctgcagggc
gggttcatctgggagttcaaggaccattccctcgatcccgcgggcgacggcgggtaccgc
tacggcggcgacttcggggacgtcccccacgacggcgcgaccctggtgaacggcatcgtc
tttcccgacctcaccccccagcccgcgctgtacgaggcacgcggcctgttcagcccggta
cggatcgtctcggacgccgcggccgcgctcgcgggggcgatcggcatccgcaaccgccag
tccttcaacgacctgagcgcctacgtcctggaactacaggtggagaacgaccggtcgacg
gacccggtcaccgtcgacgtgccggacgtcgcgcccggggcgaccgggaccatcgagctg
cccgacccgatccgcaagctgctcgggtccgcaccgccgttggccctgaccctgaccgtg
cggaccaggcagggcgcgcggtgggcaccggcgggcaccgtcgtcgccgcacaccagatc
accttcccgcggccgccggtcgccctgctgtccgccccggttcccgacgccctccgcgtc
gaccaggacgggtccgtcgtacaccccctgctgcggcgcgccccggcactgtgcctgtgg
cgggcagtcaccgacaacgacaagtccttctccctcgaccagcgcttcgtccgctccggc
ttcttccgcctcacccccggggcagtcacggccgaagcggacgggggcagcctgacgatc
accaccgcctacgccaccgcgttcggcaccgaggtgacgcaccgccgcgtcatcagcgcg
ctggccgagcacgactaccggttcgacgagcacgtccagctgcccgcggacaccgaggac
gcgctgcgggtcggcgtggagttcgagctcacgcccggtttcgacgacgcccgctgggtc
gggctcgggccgtgggagaactaccccgaccgccgctcctccgcgctcctcggctcctgg
cgggaacgcatcgacgacctggccgtgccctacctcgttccgcaggagaacggcgggcgc
ggggcggtgagcgagctgtgcctgagcggtccggccggcaccgtgcgcaccttccacccg
acgccggtgcagatggccgtcggccggcatcgcgtcgatcagctcgaggccgcggcccac
tggtgggagctcccgcccagcgacgtcaccgtcgtccacctcgacgtggcgcaccggggt
gtcggcaccgcccagctgggcccggacacccgtccccgtcaccgcctcaccgaccacgag
tacacatggacgtggcggctacggctcgagtcggccgccggggccgcggtctga
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