Parafrankia sp. EAN1pec: Franean1_3403
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Entry
Franean1_3403 CDS
T00608
Name
(GenBank) hydrogenase (NiFe) small subunit HydA
KO
K06282
hydrogenase small subunit [EC:
1.12.99.6
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre01120
Microbial metabolism in diverse environments
fre02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00633 Nitrotoluene degradation
Franean1_3403
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Franean1_3403
Enzymes [BR:
fre01000
]
1. Oxidoreductases
1.12 Acting on hydrogen as donor
1.12.99 With unknown physiological acceptors
1.12.99.6 hydrogenase (acceptor)
Franean1_3403
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Motif
Pfam:
NiFe_hyd_SSU_C
Oxidored_q6
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ABW12805
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Position
4034026..4035228
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AA seq
400 aa
AA seq
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MTSESGRPLSARLADAGVDRRSFLKFCAGITATLALPAQLAPRVAYALDKVDRPTVIWLE
FQDCAGDSEAFLRSRNPSAADLILGMISLDYHETVMAASGTAAEKARDDAVAKGGHLVVV
EGSIPTGIPGACTIGGKSAEDILREAVRGAAGIINVGTCSAFGGIPAAGPNPTGAVRVED
VVGGVPVVNLTGCPVNADNLTATIVHHLTFGEFPARDRFSRPLFAYGQRIHDTCQRRGHF
DAGEFAEQWGDAGHRNGWCLYRLGCKGPSTFHNCPSVRFNGGTSWPVAAGHGCVGCSEPG
FWDTMSPFYDRLPHVATSGFDLTADRIGVGVLAATATGFAAHGVGKVVQHRVAARREKQA
ARDLVEDDEAPTDEAATDEAATDKAHADKAHGDGETGEAR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgaatccggccggcctttgtccgcgcggctggcggacgcgggggtcgaccgg
cggtcgttcctgaaattctgcgcgggtatcaccgcgacgctcgccctgccggcccagttg
gcgccccgggtcgcctatgcgctggacaaggttgaccgtcccaccgtgatctggctggaa
ttccaggactgcgccggtgacagcgaggctttcctgcgttcgcgcaacccgtcggcggcg
gacctgattctggggatgatctcgctcgactaccacgagacggtgatggcggcctccggc
acagccgcggagaaggcccgcgacgacgcggtggcgaaaggcgggcatctcgtcgtcgtc
gagggctccattccgaccggaattcccggggcgtgcacgatcggcggcaagtcggccgag
gacatcctgcgtgaggcggtccgtggcgcggccggcatcatcaacgtcggcacctgctcg
gccttcggtgggatcccggcggccgggccgaacccgaccggggcggtccgggtcgaggac
gtcgtcggcggggttccggttgtgaacctgaccggttgcccggtcaacgcggacaacctg
accgccaccatcgtccaccacctgaccttcggtgagttcccggcgcgggacaggttcagc
cggccgctgttcgcctacgggcagcgcatccacgacacctgccagcggcgcggccacttc
gacgccggcgagttcgccgagcagtggggcgacgcgggccaccgcaacggctggtgcctg
taccggctgggctgcaaggggccgagcaccttccacaactgtcccagcgtccggttcaac
ggggggacgtcctggccggtggcggccgggcacggctgtgtgggctgctccgagccgggc
ttctgggacaccatgtcgcccttctacgaccggctgccgcacgtggcgacctccggtttc
gacctcaccgccgacaggatcggcgtcggcgtgctggcggccacggcgaccggcttcgcg
gcgcacggcgtcggcaaggtcgtccagcaccgggtcgccgcccgccgcgagaagcaggcc
gcgcgggacctggtggaagacgacgaagcgcccacagacgaagcggccacagacgaagcg
gccacagacaaggcacacgccgacaaggcgcacggcgacggagagacgggcgaagcgaga
tga
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