Parafrankia sp. EAN1pec: Franean1_3554
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Entry
Franean1_3554 CDS
T00608
Name
(GenBank) ABC transporter related
KO
K14699
ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ [EC:7.-.-.-]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Franean1_3554
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_3554
Transporters [BR:
fre02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Franean1_3554
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
AAA_21
AAA
AAA_5
AAA_30
Zeta_toxin
AAA_22
AAA_25
ABC_ATPase
AAA_29
AAA_15
AAA_16
TsaE
NACHT
AAA_18
RsgA_GTPase
nSTAND3
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABW12954
LinkDB
All DBs
Position
4216322..4218112
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AA seq
596 aa
AA seq
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MIRRLFNLLGPEHRGELRSLLGWLVGAAVLQGVAFVLLVPILRALLGDDPNEVWPWIWAL
AATTAGYGFAHRVGLLASADAGAGLSRTVHHRIGDRVAGLPLGWFSADRTAAVNQLATRD
VMDVMGVFAHLLRPLLTGFVTPGVVVALMYVFDWRLALAATLTVPMLALVYRWSTRLAHQ
ADAASDAAQVDAGGRVLEFARAQRVLRVFGRGATGSAARALDEALERQRAAGHRQLRVAV
PGLIGFAVAVQAAFTVVIILGTYLALDGSLDAPTLLAVLALAARFIEPVAEAAALGTELQ
KASRALERIENLLALPTLPQPAAPRHPEGTGIELDNVVFGYEGRRVLSGVSARLPEGTMT
ALVGPSGSGKTTITRLIARFWDTDSGAVRIGGVDVREIDPDELMSLISVVFQDVYLFEGS
IEDNIRVGRPGASAEQVREAARLARVDEIVARLPEGWDTRVGEGGSALSGGERQRVSIAR
AILKDAPIVLLDEATSALDPENEQAVQEALAALASNRTLLVIAHRLGTVMAADQILVLER
GLVVESGTHAQLIGTGGRYAAFWRRRRGAEGWRLAPGAVPTGESALARLPHPAAGR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
gtgattcggcggctgttcaacctgctcggcccggagcaccggggcgagctgcggagcctg
ctcggctggctcgtcggcgcggccgtcctgcagggcgtcgccttcgtgctgctggtgccg
atcctgcgcgcgctgctcggcgacgacccgaatgaggtctggccctggatctgggcgctc
gcggcgacgacggcgggctacgggttcgcgcatcgggtgggcctgttggccagcgccgac
gcgggcgccggcctctcacgcaccgtgcaccaccgcatcggcgaccgggtcgcgggcctc
ccgctcggctggttctcggccgaccggacggcggcggtcaaccagctcgcgacgcgggac
gtgatggacgtcatgggcgtgttcgcgcacctgctgcggccactgctgaccggtttcgtg
acccccggtgtcgtcgtcgcgctgatgtacgtcttcgactggcggctcgcgctcgccgcc
acgctcaccgtcccgatgctcgcactggtctaccggtggagcacccggctcgcccaccag
gccgacgccgccagcgacgccgcccaggtggacgccggcgggcgggtgctcgagttcgcc
cgggcccagcgggtgctacgggtgttcggccgcggggcgaccgggtccgccgcccgggcg
ctcgacgaggccctggagcggcagcgggcggccgggcaccggcagttgcgggtggcggtg
ccggggctgatcggtttcgcggtcgcggtccaggccgcgttcaccgtggtgatcatcctc
ggcacctacctcgcgctcgacggctcgctggacgcgcccacgctgctcgcggtcctcgcc
ctggcggccaggttcatcgagcccgtcgcggaggccgcggcgctgggcaccgagctgcag
aaggccagccgtgccctcgagcgcatcgagaacctgctcgccctgccgacgctgccgcaa
ccggcggccccccggcaccccgagggcaccggcatcgaactcgacaacgtcgtgttcggg
tacgagggccgccgcgtgctctccggggtgtccgcccggctgcccgagggcacgatgacc
gcgctggtgggcccatcgggctccggcaagaccacgatcacccggctcatcgcacgtttc
tgggacacggactcgggagccgtgcggatcggcggggtcgacgtccgggagatcgatccc
gacgagctgatgtcgctgatctccgtggtcttccaggacgtctacctgttcgagggcagc
atcgaggacaacatccgggtcgggcgtcccggggcgagcgccgagcaggtgcgcgaggcc
gcgcggctggcccgggtcgacgagatcgtcgcgcggctgcccgagggctgggacacccgc
gtcggggagggcggcagtgccctgtccggcggcgagcggcagcgggtctccatcgcccgc
gcgatcctcaaggacgccccgatcgtgctgctcgacgaggcgacgtccgcgctggacccg
gagaacgagcaggccgtccaggaagctctggccgcgctggcgagcaaccgcacgctgctc
gtgatcgcgcatcggctggggacggtgatggcggccgaccagatcctcgtcctggaacgc
gggcttgtcgtcgagtccggaacccatgcccagctcatcgggaccggcggccggtacgcg
gccttctggcgccgccgccgcggcgccgagggctggcgtctggcgcccggcgccgttccc
accggtgagtccgcgctcgcccgtcttccccacccggccgcgggccgctag
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