Parafrankia sp. EAN1pec: Franean1_3776
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Entry
Franean1_3776 CDS
T00608
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_3776
DNA repair and recombination proteins [BR:
fre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Franean1_3776
Archaeal homologous recombinant proteins
Franean1_3776
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Gene cluster
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Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Asp_Glu_race
Motif
Other DBs
NCBI-ProteinID:
ABW13171
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Position
4477008..4478171
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AA seq
387 aa
AA seq
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MKFLHTSDWHLGKTLKGRNRLDEQRAVLGEIIGIARKHEVDAVLVAGDVYDSAAPPAAAQ
QLAVQALVALRGTGAEVVVIAGNHDHQPTFDAYRPLMSAAGITLVGTPRTAADGGVVTFR
APGTGEPVTVAALPFVSQRYAVRAADLVTQTPDQTAARYDQVVRALMEQLRSGFDDNAVN
LVLAHLTVTNGLFGGGERMAQSIFEYHVSAAAFPADAHYVALGHLHRRQTLAAPCPVVYS
GAPLAVDFGEQENTNVVCLVEASPGVPAQVTDIALTAGRRLRTVRGTVAELAAQAPELAE
DLLRVVVREPARAGLRDEVQELLPNALEVGIDPELRVALGGSRPSAAALARRSPEDLFRE
FCAAEQFEDPRVEALFARLHDDVSSGD
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcctgcacacctcggactggcatctcgggaagaccctcaaggggcgcaaccgg
ctcgacgagcagcgcgccgtgctcggggagatcatcgggatcgcccggaagcacgaggtc
gacgcggtgctcgtcgccggggacgtctacgacagcgcggccccgccggcggcggcccag
cagctcgccgtgcaggcgctggtcgcgttgcgcggcaccggcgccgaggtggtcgtgata
gccggcaaccacgaccaccagccgaccttcgacgcctaccggccgctgatgtcggccgcc
gggatcaccctggtcgggacgccgcgcaccgccgccgacggcggggtggtcaccttccgc
gcccccggcaccggcgaaccggtcaccgtggcggcgttgccgttcgtctcccagcggtac
gccgtccgcgccgccgacctggtgacccagacgcccgaccagaccgcggcccgctacgac
caggtcgtgcgcgccctgatggaacagttgcgctccggcttcgacgacaacgcggtgaac
ctcgtcctggcccacctgacggtgacgaacggcctgttcggcggcggggagcggatggcc
cagtcgatcttcgagtaccacgtgtccgcggcggcgttccccgcggacgcccactacgtg
gcgctggggcacctgcaccggcggcagaccctcgccgcgccgtgcccggtggtgtactcc
ggcgcgccgctcgcggtcgacttcggcgagcaggagaacacgaacgtggtgtgcctcgtc
gaggcgagccccggcgtccccgcccaggtcaccgacatcgcgctgacggccggccggcgg
ctgcggacggtccggggcaccgtcgcggagcttgccgcgcaggccccggagctcgccgag
gacctgctgcgggtggtcgtgcgcgaaccggcccgcgcggggctgcgcgacgaggtccag
gagctgctgccgaacgcgctcgaggtcgggatcgacccggagctccgggtggcgctcggc
gggtcgcgcccgagcgcggcggcgctggcgcggcgcagcccggaggacctgttccgggag
ttctgcgccgccgagcagttcgaggatccccgggtcgaggcgctgttcgcccggctgcac
gacgacgtctccagcggcgactga
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