Parafrankia sp. EAN1pec: Franean1_3919
Help
Entry
Franean1_3919 CDS
T00608
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATPase subunit
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Franean1_3919
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_3919
Transporters [BR:
fre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Franean1_3919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_22
nSTAND1
AAA_16
TniB
AAA_29
DUF87
Mg_chelatase
NACHT
NB-ARC
Sigma54_activat
RPA_C
Motif
Other DBs
NCBI-ProteinID:
ABW13309
LinkDB
All DBs
Position
complement(4686010..4687023)
Genome browser
AA seq
337 aa
AA seq
DB search
MSTDPVLQVRNLRAYIGTPRGVVRAVDDVSLDLDSAQAMGVVGESGSGKSVMARAIMGLM
PARSGCSGQVVFQGRDLLTLPRKQRAEIWGKQIAMVFQDPGRSLNPVVRVERQLTEGMRK
HLGVGRSEARGRALDLLREVGVPDPERRLRNYPHELSGGMRQRVMIATALACEPTLLIAD
EPTTALDVTVQRQILDLLRRVQRNHGMSMILISHDLAVVAGRTDRVAVMYAGRLAEAGAT
RQVFEAPRHRYTHALLEATPTIDHERHAPMRLIQGSLPNPIDPPPGCRFAARCGHVDPKC
ADPGPQMVSVGSDHDVACISPVQDGAAVVPGGELVGR
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagtactgatcctgtcctgcaggtgcgcaatctgcgcgcctacatcggcaccccgcgt
ggagtcgtgcgcgccgtcgacgacgtctccctcgacctcgactccgcccaggccatgggc
gtggtcggggagtccgggtccggcaagtcggtgatggcccgcgcgatcatgggcctgatg
ccggcacggtccgggtgctccggccaggtggtgttccagggccgggacctgctcaccctc
ccccgcaagcagcgcgccgagatctggggcaagcagatcgccatggtgttccaggaccca
gggcgctcgctcaacccggtggttcgggtggaacggcagctcaccgagggaatgcgcaag
cacctcggcgtcggccgctccgaagctcgcggtcgggccctcgaccttctgcgggaggtc
ggggtgcccgaccccgagcggcgcctgcgcaactacccgcacgagctctccggcggtatg
cggcagcgagtcatgatcgctaccgcgctcgcctgcgagccgacgctgctcatcgccgac
gagccgaccacagcgctggacgtgaccgtccagcgccagatcctcgacctgttacgccgg
gtccagcgcaaccacggaatgtccatgatcctgatcagccacgacctggcggtcgtcgcc
ggccgcaccgaccgggtcgcggtgatgtacgcggggcgcctggccgaggccggggccacc
cggcaggtcttcgaggccccccggcaccgctacacccacgcgctgctcgaggcgaccccg
accatcgaccacgagcggcacgcaccgatgcggctcatccagggctcgctgcccaacccc
atcgacccgccccccggatgccggttcgccgcgcgctgcgggcacgtcgaccccaagtgc
gccgaccccgggccgcagatggtctccgtcggctcggatcacgatgtcgcctgcatcagc
ccggtgcaggacggcgccgcggtcgtccccggaggtgagctcgttggccggtag
DBGET
integrated database retrieval system
