Parafrankia sp. EAN1pec: Franean1_3920
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Entry
Franean1_3920 CDS
T00608
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Franean1_3920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_3920
Transporters [BR:
fre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Franean1_3920
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABW13310
LinkDB
All DBs
Position
complement(4687062..4688633)
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AA seq
523 aa
AA seq
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MFRKSRLVATAVVCGAALALGACGGGGGDDATSSTNGAAGQPVAGGEGRILLLGDPRSLD
PATLSNQAAITAPVGNALYGTLMITDQAGKVKYTMAESFDTTDTGKTFTLKLKHGLVFSD
GKPLNAEAVKFNWDRIKDPTVGSSYVVDARMIESTEVVDDVTLKVTMVNPVPAYAQAVLN
SSLNWIASPDALKAGRDSFDKNPIGAGPFTLASWTRQADIKFVKNPKYWDAPKPYLDRLT
MRSATDATQRLNTVISGGADVAIDTNTVNIDKAETSDLNAVVTTLNGGNFMAFNSRRAPF
DDIRARQAVSAAIDLEALNLAAYNGTAPLPDTLFDKSSPLFSDTPLHKTDKALAQKLLDE
LAADGKPVKFTFSSFPSSENRAIAENIQAQLSAFKNITVSVKIVDLGQVAALRTTFDFDL
LVSSASFQDPEPRLWQAFSQDSVANLSGVKDKELSDALLAGRTATTEADRKAAYETVQER
LVALSPVVFYQRSTNAAIGTAKVGGIVQYGSGSLLVEELWIKK
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgttccgtaagtcccggttagtcgccaccgctgtcgtgtgcggcgcggcactcgccctg
ggggcctgtggtggtggaggcggtgacgacgccacctcgtcgacgaacggcgccgcgggc
caaccggtcgccggcggcgagggccggatcctgctgctgggcgacccgcgcagcctggac
ccggcgaccctcagcaaccaggccgcgatcaccgccccggtcggcaacgcgctgtacggc
acgctgatgatcaccgaccaggccggcaaggtcaagtacacgatggccgagtcgttcgac
acgaccgacaccggcaagaccttcaccctcaagctgaagcacggcctggtgttctccgac
ggcaagccgctcaacgcggaggccgtcaagttcaactgggaccgcatcaaggacccgacc
gtgggctcctcctacgtcgtggacgcgcggatgatcgagtcgaccgaggtggtcgacgac
gtgacactgaaggtcacgatggtcaaccccgtgccggcgtacgcccaggccgtcctgaac
tcgtcactgaactggatcgcctcgcccgacgctctgaaggccggacgggactccttcgac
aagaacccgatcggcgccgggccgttcaccctggcgagctggacccgccaggcggacatc
aagttcgtcaagaaccccaagtactgggacgcgcccaagccctacctggaccgcctcacc
atgcgctcggcgaccgacgccacccagcgcctcaacacggtgatcagcggtggcgccgac
gtcgcgatcgacacgaacacggtcaacatcgacaaggctgagacgtccgatctcaacgcg
gtcgtgaccaccctcaacggcggcaacttcatggcgttcaactcgcgccgggcgccgttc
gacgacatccgtgcccgccaggcggtgtcggcggcgatcgacctcgaggcgctcaacctc
gccgcctacaacggcaccgctcccctgcccgacacgctgttcgacaagagctcacctctc
ttctcggacacgccgctacacaagacggacaaggctctcgcccagaagctcctcgacgag
ctcgccgccgacggcaagccggtgaagttcaccttctccagcttcccgtcctcggagaac
cgggcgatcgcggagaacatccaggcccagctgagcgccttcaagaacatcacggtctcc
gtcaagatcgtcgacctcggccaggtcgcggcgctgcgcacgaccttcgacttcgacctg
ctcgtctcgtcggcgtcgttccaggacccggagccgcggctgtggcaggcgttcagccag
gactccgtggcgaacctgtccggtgtcaaggacaaggagctctcggacgcgctgctcgcg
ggtcgcaccgcgacgacggaggcggaccgcaaggccgcctacgagacggtgcaggagcgg
ctggtcgcgctcagcccggtcgtgttctaccagcggtcgacgaacgcggcgatcggcacc
gccaaggtcggcgggatcgtccagtacggcagcggctcgctgctggtcgaggaactctgg
atcaagaagtag
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