Parafrankia sp. EAN1pec: Franean1_4048
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Entry
Franean1_4048 CDS
T00608
Name
(GenBank) Carbamoyl-phosphate synthase L chain ATP-binding
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00280
Valine, leucine and isoleucine degradation
fre01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
Franean1_4048
Enzymes [BR:
fre01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
Franean1_4048
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
BT_MCC_alpha
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
HlyD_3
ATP-grasp_3
ATPgrasp_ST
HlyD_D23
LtuA
Motif
Other DBs
NCBI-ProteinID:
ABW13435
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Position
4825900..4828002
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AA seq
700 aa
AA seq
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MFHTVLVANRGEIAVRVIRTLRELGVRSVAVFSDADAGARHVTEADVAVRLGPARALDSY
LNIERVLAAAAATGAQAVHPGYGFLAENPVFAQACADAGVVFVGPSARVVELMGNKIAAK
RTVAAAGVPVVPGRVEPGMSDADLVAASTEIGYPVLVKPAAGGGGKGMRLVREPAALAEA
LRSARREAAASFGDDTLFVERFVDTPRHIEVQILADTHGNVIHLGERECSLQRRHQKIVE
EAPSVLLDAATRARIGGAAVDVAAAVGYVGAGTVEFVVGTDRPDEFFFMEMNTRLQVEHP
VTELVTGVDLVAEQLRVAAGEPLRITQDEVRLTGHAVEARVYAEDPARGFLPTGGDVLVL
REPAGAGVRTDSGLRAGTEVAATYDPMLAKIVAWAPDRAGALARLDAALAGTTLLGVTTN
IGFLRRLIGHPDTRSGRLDTGLVERHLEALTDPAGQGLPGEPTADDALEVFGLVGAVGMV
PTGSVVDPWDVPSGWRLGERAWSRWSVAAPGGAGGSPAREVAVQRAADGRLLVRLDGGGP
RAAELDWLPAPTPGQPADALVTVDGRTRRWQVAASGSTIWVGADGFTWALAERRAEGGAD
AAAGEHSGEARSPMPGTVVDVRAAPGDVVEPGAPLVVVEAMKMEHTVVAAVAGQVKDVLV
RVGDSVALDALLAVVEPAPDGVADGAGAADGPAGAADAPA
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgttccacacggtgctcgtcgccaaccggggtgagatcgcggtccgggtcatccggacc
ctgcgtgagctcggcgtccgctcggtggcggtgttctccgacgccgacgcgggcgcccgg
cacgtgaccgaggcggacgtcgcggtgcgcctcggcccggcccgcgcgctcgactcctac
ctcaacatcgagcgggtgctcgccgccgcggcggcgaccggggcgcaggcggtgcacccc
ggctacggcttcctcgccgagaacccggtgttcgcgcaggcctgcgccgatgccggtgtg
gtgttcgtgggcccgtccgcgcgggtcgtcgagctgatgggcaacaagatcgcggccaag
cgcaccgttgccgcggccggcgtcccggtcgtgcctggccgcgtcgagccggggatgtcc
gacgccgacctggtcgcggcctcgaccgagatcggctacccggtgctggtcaagccggcc
gccggcggcggcggcaagggcatgcggctcgtgcgcgagcccgccgcgctcgccgaggcg
ctgcgctcggcccgccgggaggccgccgcgtccttcggcgacgacacgctgttcgtcgag
cggttcgtcgacaccccccggcacatcgaggtgcagatcctcgccgacacccacggcaac
gtgatccacctcggcgagcgggagtgcagcctgcagcgccgccaccagaagatcgtcgag
gaggcgccgtcggtgctgctcgacgccgcaacccgggcgcgcatcggcggtgcggctgtc
gacgtcgccgccgccgtcgggtatgtcggcgccggcacggtcgagttcgtcgtgggcacc
gaccggcctgacgagttcttcttcatggagatgaacacccggctgcaggtcgagcacccg
gtgaccgagctggtcaccggcgtcgacctggtcgccgagcagctgcgggtcgccgccggc
gagccgctgcggatcacccaggacgaggtgcgcctgaccggtcacgccgtcgaggcccgg
gtgtacgccgaggatccggcccgcggcttcctgcccaccggcggggacgtcctcgtccta
cgggagccggcgggcgcgggggtacgcacggactcgggcctgcgggcgggtacggaggtc
gccgccacctacgacccgatgctggccaagatcgtcgcctgggcgccggaccgggcgggt
gcgctggcccgcctcgacgccgcgctcgcgggcaccacgctgctgggcgtcaccacgaac
atcggcttcctgcgccgcctgatcggccatcccgacacccgttccggtcgcctcgacacc
ggtctggtcgagcggcacctcgaagcactcactgatcccgccgggcagggcctgcccggc
gagcccacggcggacgacgccctggaggtgttcgggctggtcggcgcggtcgggatggtg
ccgaccggatcggtcgtcgacccctgggacgtgccgtcgggctggcggctgggcgaacgg
gcctggtcgcgctggtcggtcgccgctcccggcggggccgggggttcgccggcacgcgag
gtcgcggtgcaacgcgccgccgacggccggctgctggtccgcctggacggcggcgggcca
cgcgcggccgagctcgactggctgcccgcgcccaccccgggtcagcccgcggacgcgctg
gtcacggtcgacggccggaccaggcggtggcaggtggccgcgagcgggagcacgatctgg
gtgggggccgacgggttcacctgggcgctcgcggagcggcgggcggagggcggcgccgac
gcggcggccggcgagcacagcggcgaggcgcgcagcccgatgccgggcaccgtcgtcgac
gtgcgggcggcccccggcgacgtcgtcgagcccggtgccccgctggtggtcgtcgaggcc
atgaagatggagcacaccgtggtcgcggcggtcgccggccaggtgaaggacgtcctcgtc
cgggtcggcgactcggtcgcgctggacgcgctgctcgcggtcgtcgagccggcgcccgac
ggggtggcggacggagccggggcggccgacgggcccgcgggagcggccgatgccccagcc
tga
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