Parafrankia sp. EAN1pec: Franean1_4305
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Entry
Franean1_4305 CDS
T00608
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00061
Fatty acid biosynthesis
fre00071
Fatty acid degradation
fre01100
Metabolic pathways
fre01212
Fatty acid metabolism
fre02024
Quorum sensing
fre04146
Peroxisome
Module
fre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Franean1_4305
00071 Fatty acid degradation
Franean1_4305
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Franean1_4305
09145 Cellular community - prokaryotes
02024 Quorum sensing
Franean1_4305
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fre01004
]
Franean1_4305
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fre04147
]
Franean1_4305
Enzymes [BR:
fre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Franean1_4305
Lipid biosynthesis proteins [BR:
fre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Franean1_4305
Exosome [BR:
fre04147
]
Exosomal proteins
Exosomal proteins of breast milk
Franean1_4305
Exosomal proteins of breast cancer cells
Franean1_4305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
ABW13689
LinkDB
All DBs
Position
complement(5143111..5144514)
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AA seq
467 aa
AA seq
DB search
MSDRPALVFEEQRYSLERLDALTDGLATALAKHGVRAGERVALMASNRPEFVLAVRAVWR
LGAAIVLLSPSWRRAEIEHALAVTEPAHAIGDQDALAELLPMWHLDEPIGAGEGPFPTPD
PHADALLVFSSGTTGLPKAARHTRASFGAAVGHWRDALGLTAADRVQITTPPSHILGLLN
IVTALETGAWMRLHRRFDLELMLRSIETDRITVEMAVAPIALAIAAHPTLESFDLSSLRY
IMWGATPVTASVAETVTRRTGVGWVPAYGASELPVIACNPLAGARLDSVGRAVPGVRLRV
VSLESGAPVGPGETGEIQARAESLMAGYLPAEATADAFDDGWYRTGDVGNLDADGWLRLT
DRVKEMVKVRGFQVAPAEVEGVLHAHPAVADCAVFGLPDTADGEVLVAAVVTSTQVDPAE
LVAWVGERLASYKRPRRIELVEEIPRLPSGKVLRRVLKERYGRTSDD
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaccgccccgcgctcgtcttcgaggaacagcggtacagcctcgagcgactcgac
gcgctgacggacgggctggccacggcgttggcgaaacatggggtccgggcgggggaacgc
gtcgcgctgatggcctcgaaccggccggagttcgtactggccgtccgggctgtctggcga
ctgggtgcggccatcgtactgctgagcccgtcctggcggcgggccgagatcgaacacgcg
ctggccgtcaccgagcccgcgcatgccatcggtgaccaggacgcgctggccgagctgctg
ccgatgtggcacctcgacgagccgatcggcgcgggggaggggccgttcccgacaccggac
ccgcacgccgacgcgctactggtcttcagctccggcacgaccggcctgccgaaggccgcc
cggcacacgcgggcctcgttcggcgcggccgtcgggcactggcgcgacgcactcggcctc
accgccgcggaccgcgtccagatcaccaccccgccctcgcacatcctcggcctgctcaac
atcgtcaccgcgctggagaccggcgcctggatgcggctgcaccgccggttcgacctcgag
ctgatgctgcgctcgatcgagaccgaccggatcaccgtcgagatggccgtcgcgccgatc
gcgctggccatcgccgcccaccccacgctggagtccttcgacctgtcgtcgctgcggtac
atcatgtggggcgcgacaccggtgacggccagcgtcgccgagaccgtcaccaggcgcacg
ggcgtcggctgggtgcccgcctacggggccagtgagctgccggtcatcgcctgcaacccg
ctcgcgggcgcccggctcgacagcgtcggccgcgccgtgccgggcgtgcggctgcgggtg
gtgtcgctggagagcggagcgccggtcggccccggcgagaccggcgagatccaggcccgc
gccgagtcgctgatggccggctacctgcccgccgaggcgacggcggacgcgttcgacgac
ggctggtaccgcaccggcgacgtcggcaacctcgacgcggacgggtggctccggctcacc
gaccgggtcaaggagatggtcaaggtgcgcggcttccaggtcgcgcccgccgaggtcgag
ggtgtgctgcacgcgcaccccgcggtcgccgactgcgccgtgttcggcctccccgacacg
gccgacggcgaggtgctcgtcgcggccgtcgtgacgagtacccaggtcgacccggcggag
ctcgtcgcgtgggtgggcgaacggctcgcctcctacaagcggccccgccggatcgagctc
gtggaagaaatcccccgcctgccctcgggcaaggtactgcggcgagtcctcaaggagcgc
tatggacgtacgtctgacgactga
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