Parafrankia sp. EAN1pec: Franean1_4601
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Entry
Franean1_4601 CDS
T00608
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Franean1_4601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_4601
Enzymes [BR:
fre01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Franean1_4601
DNA repair and recombination proteins [BR:
fre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Franean1_4601
Prokaryotic type
Franean1_4601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABW13972
UniProt:
A8LD98
LinkDB
All DBs
Position
5481265..5481942
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AA seq
225 aa
AA seq
DB search
MPAQPLRDILEPGWAKALEPMADRIAAMGDFLRAEIAAGRSYLPAGQHVLRAFQQPFDDV
RVLIVGQDPYPTPGMAIGYSFAVAPEVRRLPGSLENIFQELCADLSVPRPTNGDLTPWTR
QGVLLLNRVLTTAPRQPGAHRGKGWEEVTEQAIRALAARGTPLVAILWGADARSLRPFLS
PAPTIESAHPSPRSADRGFFGSRPFSRANNHLLEQGAQPVDWHLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgccggcacaacccctgcgggacatcctcgagccgggctgggcgaaggccctcgagccg
atggccgatcgcatcgccgccatgggtgacttcctgcgcgcggagatcgcggcgggacgc
agctacctaccggcgggccagcacgtgctgcgagccttccagcaacccttcgacgacgtc
cgcgtactcatcgtcggccaggatccctacccgaccccgggcatggccatcgggtacagc
ttcgcggtcgcgcccgaggtacgccggctcccgggcagcctggagaacatcttccaggag
ctgtgcgcggatctcagcgtgcccaggcccacgaacggcgacctcacaccgtggacccgc
caaggggtactgctgctgaacagggtgctcaccacggcaccgcgccagcccggcgcacac
cgaggcaagggctgggaggaagtcaccgagcaggcgatccgcgccctggccgcccgcggc
accccgctggtcgcgatcctctggggcgccgacgcacgcagcctgcgccccttcctctcc
cccgccccgacaatcgagtccgcccacccatcgccccgctccgcggaccgcggcttcttc
ggctcccgaccgttcagccgcgccaacaaccacctcctcgaacaaggcgcccaacccgtc
gactggcaccttccctga
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