Parafrankia sp. EAN1pec: Franean1_4754
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Entry
Franean1_4754 CDS
T00608
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00061
Fatty acid biosynthesis
fre00071
Fatty acid degradation
fre01100
Metabolic pathways
fre01212
Fatty acid metabolism
fre02024
Quorum sensing
fre04146
Peroxisome
Module
fre_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Franean1_4754
00071 Fatty acid degradation
Franean1_4754
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Franean1_4754
09145 Cellular community - prokaryotes
02024 Quorum sensing
Franean1_4754
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fre01004
]
Franean1_4754
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fre04147
]
Franean1_4754
Enzymes [BR:
fre01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Franean1_4754
Lipid biosynthesis proteins [BR:
fre01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Franean1_4754
Exosome [BR:
fre04147
]
Exosomal proteins
Exosomal proteins of breast milk
Franean1_4754
Exosomal proteins of breast cancer cells
Franean1_4754
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABW14121
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Position
5677533..5679254
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AA seq
573 aa
AA seq
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MPTDSASEDVLSTARPWLAAYPPQIDPSPRLAHSSIVDAWRDRVAGNPGRTAVRYFDGSL
SAAELDAHTDALAAELQERDVRPGERVGVYLQNVPHYPISLLAIWKAGGIAVPLNPMYRG
RELRRLIDDSGTTGIILARGTDAQTRETLAGSTVRWLLSASARDFQTADDPRVFGAAGDP
APSPDGDLAAILSERRGQHPEPVETALDDTAFLTYTSGTTGPPKGALNTHRNCLNSVLNY
GRWLLLQPGDVVFAIAPLFHITGLSLNAGIALLNDTTLSMSGRFEPSVVLEAFRDHGVTT
TIGSITAFNAFFRVDGAGPEHFAAVKRLYSGGAPIPPSTVEAFRSRFGPYLHNIWGMTET
TGGGIAVPPGAAAPVHGPSGTLSIGVPMQNVDVWITDESGAPRPPGVEGELVISAPQVIP
GYWRNPEASAHALAGGRLRTGDVAVLDAAGWVYLVDRVKDQINTSGFKVWPREVEDVLYE
HPDVFEAAVVGLPDAYRGETVAAYVSLRDGAATTPEELTAFARERLAAYKYPRRISILPE
LPKTATGKIQRAVLREQAPAGQVIPALPRAEPG
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccgattccgcgagcgaggacgtcctctcgaccgctcggccgtggctcgccgcg
tacccaccgcagatcgacccgtcgccgcgcctcgcccactcctcgatcgtcgacgcgtgg
cgggaccgggtggccggcaaccccggccggacggcggtgcggtacttcgacggctccctc
agtgcggccgaactcgacgcccacaccgacgccctcgccgccgagctgcaggaacgggac
gtccggccgggcgaacgcgtgggcgtctacctgcagaacgtgccgcactacccgatcagc
ctgctggcgatctggaaggccggcggcatcgcggtgccgctcaacccgatgtaccgcggg
cgcgagctgcggcgcctgatcgacgactccggcaccacggggatcatcctggcccgcggg
accgacgcccagacccgcgagacgctcgcgggcagcaccgtccgctggctgttatccgcc
tccgcgcgcgacttccagacggcggacgacccgcgcgtcttcggcgccgccggcgatccc
gcgccgtcgcccgacggcgatctcgcggcgatcctgtcggaacgccgggggcagcacccc
gagccggtcgagaccgcccttgacgacaccgccttcctcacctacacctcaggcaccacg
ggcccacccaaaggcgcgctgaacacacaccggaactgcctcaactcggtcctgaactac
ggccgctggctactcctccagcctggcgacgtggtgttcgcgatcgcccccctcttccac
atcactgggctctccctgaacgcgggcatcgcactgctgaacgacacgacactgagcatg
agcggccgcttcgagccctcagtcgtgctcgaggccttccgtgaccacggcgtgacgacc
accatcggttcgatcacggcgttcaacgcctttttccgggtggacggcgcgggccccgag
catttcgccgcggtgaagcggctctattccggcggcgcgcccatcccgccgtcgacggtg
gaggccttccggtcgaggttcgggccctacctgcacaacatctggggcatgaccgagacg
accggcggtggcatcgccgtgccccccggcgcggcggcacccgtgcacggcccgagcggc
accctgtcgatcggtgtgccgatgcagaacgtcgacgtgtggatcaccgacgagagcggc
gcgccgcggccgccgggcgtcgagggtgagctggtcatctccgcgccgcaggtcatcccc
ggctactggcgcaaccccgaagcgtcggcgcacgcgctggcgggcgggcgactgcgcacc
ggggatgtcgccgtcctcgacgccgccggctgggtctatctcgtcgaccgggtcaaggac
cagatcaacacgtcgggcttcaaggtctggccgcgcgaggtcgaggacgtcctgtacgag
caccccgacgtcttcgaggccgccgtggtcggcctgccggacgcctaccgcggcgagacc
gtggcggcctacgtgtcgctgcgcgacggcgcggccaccactcccgaggagctgaccgcc
ttcgcccgggagcggctcgccgcgtacaagtacccgcgccggatctcgattcttccggag
ctgccgaagaccgccaccggcaagatccagcgggcggtgctgcgcgaacaggcccccgcg
ggacaggtgatccctgccctgccgcgggcagaacccggctga
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