Parafrankia sp. EAN1pec: Franean1_4820
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Entry
Franean1_4820 CDS
T00608
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Franean1_4820
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_4820
Transporters [BR:
fre02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Franean1_4820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABW14186
LinkDB
All DBs
Position
5754820..5756490
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AA seq
556 aa
AA seq
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MSRTIRPRRPAHLARTSRLLSAFALVPALVLGLAACGDDGDDAGGEAASPTSGGTLTIAL
SSDPVSIYPRAVSPIVRDVARPVVDSLLALDPKTRQPVPWLAEKYEANADATEYTFHLRA
GVTFSDGTPLTAEVVKRNFDDILANAAKSTGSAALSTLKTSGYTGTDAVDELTVVQHFGA
AFPAWPVALANTGFGILAPATLDLPYEQRFNKVVGSGPFVLTSYTKNSEVVLSRRDDYRW
APRYRSRTGDAYLDKVVYRIIEEPSVRAGALQNGQVQVSTSLNPADIEAAGSAGATVITQ
PLPRNTEALVVTGADRTPLNELPVRQAIVRAVDTGAIRDSLLHPSFKLPTSVLTSTVIGW
ADQSAHLKTDVDEANRLLDGAGWRRGGDSGIREKDGRKLTVVFGWIDRGNPWDQGLVELL
KAQLAEVGIDLQPRLDTAAAAVEALGKHDQYDLFLAGVAGGVDPDNGLRGSFANAAPNIY
NVQDTALQPLLQQQAVTTDPDKRAGILADVQERIAEQGLAVPLVEDTAVVGVGANVHDFA
LDFDSRIPPLFDVWVS
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaaccatccggccgcgaaggccggcccacctggcgcgcacatcgcgcctgctc
agcgcattcgcgctcgtacccgcgctcgtgctgggactcgcggcgtgcggcgacgacggg
gacgacgccggcggcgaggccgcctcgccaacgtccggcggaacgctgaccatcgcgctg
agcagcgacccggtgagcatctacccgcgggcggtgagcccgatcgtgcgcgacgtggcc
cggccggtcgtcgactcgctgctcgcgctcgacccgaagacccgccagccggtgccgtgg
ctggcggagaagtacgaggccaacgccgacgccaccgagtacaccttccacctgcgcgcg
ggcgtgaccttctccgacggcacgccgctgaccgccgaggtggtgaagcggaacttcgac
gacatcctcgccaacgcggcgaagagcactggttccgcggcgctgtcgacgctgaagacc
agcggctataccggcaccgacgccgtggacgagctcaccgtcgtccagcatttcggcgcg
gcgttcccggcgtggccggtcgcgctggcgaacaccggattcggcatcctcgccccggcc
accctggatctgccctacgagcagcgcttcaacaaggtcgtcggctccggtccgttcgtc
ctcacgtcgtacacgaagaacagcgaggtcgtgctcagccggcgcgacgactaccggtgg
gcgccgcggtaccgctcacgtaccggtgacgcctacctcgacaaggtcgtctaccggatc
atcgaggagccgagcgtccgcgccggtgccctgcagaacggccaggtccaggtgtcgacg
tcactcaacccggccgacatcgaggccgccgggtccgcgggcgccacggtcatcacgcag
ccgctgccccgcaacaccgaggccctcgtcgtgaccggcgccgaccggacgccgctcaac
gaactacccgtccgccaggcgatcgtgcgcgccgtcgacaccggcgcgatccgcgactcg
ctgctgcacccgtcgttcaagctgcccacgagcgtcctcacctcgaccgtcatcgggtgg
gcggaccagtcagcgcatctgaagaccgacgtcgacgaggcgaaccgcctgctggacggg
gccggctggcggcgcggcggcgacagcggcatccgggagaaggacggccggaagctcacc
gtcgtcttcggctggatcgatcgcggcaacccctgggaccagggcctggtggaactactc
aaggcgcagctcgccgaggtcggcatcgacctgcagccccggctggacaccgccgccgcc
gccgtcgaggccctcggcaagcacgaccagtacgacctgttcctggcgggtgtcgccggg
ggcgtcgacccggacaacgggctgcgtggcagcttcgccaacgccgcgccgaacatctac
aacgtccaggacacggccctgcagccactgctgcagcaacaggcggtgacgaccgacccg
gacaagcgggccggcatcctcgccgacgtccaggagcggatcgccgagcagggcctcgcc
gtgccgctcgtcgaggacaccgcggtcgtcggcgtgggggcgaacgtgcacgacttcgcc
ctcgacttcgactcccgcatccccccgctgttcgacgtctgggtctcctga
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