Parafrankia sp. EAN1pec: Franean1_5149
Help
Entry
Franean1_5149 CDS
T00608
Name
(GenBank) pyridoxine biosynthesis protein
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00750
Vitamin B6 metabolism
fre01100
Metabolic pathways
fre01240
Biosynthesis of cofactors
Module
fre_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
Franean1_5149
Enzymes [BR:
fre01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
Franean1_5149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
TetR_C_27
Dus
IGPS
His_biosynth
NanE
OMPdecase
NMO
Glu_synthase
DHO_dh
Motif
Other DBs
NCBI-ProteinID:
ABW14507
LinkDB
All DBs
Position
complement(6170058..6171023)
Genome browser
AA seq
321 aa
AA seq
DB search
MMSDGLTAPAPAPGASPSGPVAPADGAERHAGTARVKRGMAEMLKGGVIMDVVTPEQARI
AEEAGAVAVMALERVPADIRAQGGVARMSDPDMISGIIEAVSIPVMAKARIGHFVEAQII
QALGVDYVDESEVLTPADPNHHIDKWGFTVPFVCGATNLGEALRRISEGAAMIRSKGEAG
TGEVSNAVVHMRTIRSEIARLSGLPSEELYAAAKELRAPVELVTEVARLGRLPVVLFTAG
GIATPADAALMMQLGADGVFVGSGIFKSGDPARRARAIVEATTMYNDPGVLAKVSRGLGE
AMVGINVGELPPEARFAARGW
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccgacggcctgaccgcccccgcccccgccccgggcgcttcgccatccggcccc
gtcgcgccggcggacggcgcggagcggcacgccggcaccgcccgggtcaagcgcggcatg
gcggagatgctcaagggcggcgtcatcatggacgtcgtcacccccgaacaggcccgcatc
gccgaggaggcgggcgccgtcgcggtcatggcgctggagcgggtgcccgcggacatccgg
gcgcagggcggcgtggcgcggatgagcgaccccgacatgatctccgggatcatcgaggcg
gtctcgatcccggtcatggccaaggcccgcatcgggcacttcgtcgaggcgcagatcatc
caggcgctgggtgtggactacgtcgacgagtccgaggtcctcaccccggcggacccgaac
caccacatcgacaagtggggcttcacggttcccttcgtctgcggagcgacgaacctgggc
gaggcgctgcggcggatctccgagggtgccgcgatgatccgctcgaagggcgaggcgggt
accggcgaggtctccaacgccgtggtgcacatgcgtacgatccggtcggagatcgcgcgg
ctgtcggggctgccgtccgaggagctctacgccgcggccaaggagctgcgtgcgccggtg
gagctcgtcaccgaggtcgcgcggctgggtcggctgccggtcgtgctgttcaccgcgggc
ggcatcgccaccccggccgacgcggcgctgatgatgcagctcggcgcggacggcgtgttc
gtcggctccggcatcttcaagtccggcgacccggcgcggcgcgcccgggcgatcgtcgag
gccacgaccatgtacaacgaccccggcgtgctggcgaaggtgtcgcgcggcctcggtgag
gccatggtcggcatcaacgtcggcgagctcccgcccgaggcgcgcttcgccgcccgcggc
tggtga
DBGET
integrated database retrieval system