Parafrankia sp. EAN1pec: Franean1_5312
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Entry
Franean1_5312 CDS
T00608
Name
(GenBank) MscS Mechanosensitive ion channel
KO
K22044
moderate conductance mechanosensitive channel
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_5312
Transporters [BR:
fre02000
]
Other transporters
Pores ion channels [TC:
1
]
Franean1_5312
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
MS_channel_1st
Motif
Other DBs
NCBI-ProteinID:
ABW14670
LinkDB
All DBs
Position
complement(6396499..6397863)
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AA seq
454 aa
AA seq
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MSISRVPFGAVPFGGVPAEPVAAGLPPAVMGAEPSLLAQPVIPMLGAILSPTAAPTTAAT
VSPSPIPSVSISPGPTTDPFVSIEGVANALRDACGTDPGLMCRTVYDLTHSNYLASGAEV
FLGTPIKISLILLLAMVIRTLLHRFIRRTTERAASGRSTGMLRGLRSNTLLGAFGDPTVL
LERRRQRAGTVGSLLRSVTSIFVFGLAFLTILGELGLNLAPIVASAGVLGIAVGFGAQNL
VRDFLSGMFMLLEDQYGVGDVIDVGPVSGTVEAVSLRMTRLRDVEGTVWYVRNGEITRVG
NKSQQWARTVLDVPLDYDTEVAAAKRVLVRTADKLWKDEAWSGLILAEPEVWGMETMTAD
GYTLRIAIKTQPLKQWDVARELRERVRASLGRAGIELGTVQRSEVVVVDDDDDDKPAEEE
ETPGGTGGSPGQGADDVPTPRIDPPAPARSGHSA
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgtccatctcacgtgtcccgtttggtgctgtcccgttcggtggcgtgcccgccgaaccg
gtcgcggccgggctgcccccggctgtcatgggtgcggagccgtccctgctggctcagccc
gtgatcccgatgctcggcgcgatcctgtcgcccaccgccgcaccgacgaccgcggcgacg
gtctcgcccagccccataccctcggtgtcgatctcacctggtccgacgacggatccgttc
gtctcgatcgagggtgtcgccaacgcgctgcgggacgcctgcggcacggaccccggcctc
atgtgccgcaccgtgtacgacctcacgcacagtaactatcttgcgtccggtgccgaggtg
ttcctcggtacgccgatcaagatttcgctgattctgctgctcgcgatggtgatccgcacg
ctgctgcaccggttcatccggcggaccaccgaacgggccgcctcggggcgcagcaccggc
atgctgcgcgggctgcggtcgaacaccttgctgggcgcattcggtgatccgaccgttctg
ctcgagcggcggcgccagcgcgccggaaccgtcggatcgctgctgcgcagcgtgacgtca
atctttgtgttcgggctggctttcctcacgatcctcggcgagctcggcctgaatctagcc
ccgatcgtggccagcgccggagtgctcggcatcgccgtcggtttcggtgcgcagaacctc
gtgcgcgacttcctgtcgggcatgttcatgctgctggaggaccagtacggcgtcggtgac
gtgatcgacgtcggcccggtctcgggcaccgtcgaggcggtgagcctgcggatgacccga
ttgcgcgacgtcgaggggacggtctggtacgtccgcaacggcgagataacccgggtcggg
aacaagagccagcagtgggcacgcaccgttctcgacgtcccgctcgattacgacaccgag
gtcgccgccgcgaaacgggtgctcgtccggacggccgacaagctgtggaaggacgaggcc
tggtccggcctgatcctcgccgagccggaggtctggggcatggagaccatgaccgcggac
ggctacacgctgcggatcgccatcaagacccagccgctcaagcagtgggacgtcgcccgc
gagctgcgggagcgggtccgggcgtcgctcggccgggccgggatcgagctcggcaccgtc
cagcgcagcgaggtcgtggtcgtcgacgacgatgacgacgacaagcccgccgaggaggag
gagacgccgggcggcaccggcggctcgccgggccagggcgcggacgacgtgccgacaccc
aggatcgatccgcccgcgccggcccgttccgggcatagcgcctga
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