Parafrankia sp. EAN1pec: Franean1_5735
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Entry
Franean1_5735 CDS
T00608
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre03030
DNA replication
fre03430
Mismatch repair
fre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Franean1_5735
03430 Mismatch repair
Franean1_5735
03440 Homologous recombination
Franean1_5735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fre03032
]
Franean1_5735
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_5735
Enzymes [BR:
fre01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Franean1_5735
DNA replication proteins [BR:
fre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Franean1_5735
DNA repair and recombination proteins [BR:
fre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Franean1_5735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ABW15085
LinkDB
All DBs
Position
6969816..6970529
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AA seq
237 aa
AA seq
DB search
MAWWQRPMAVLDFETTGTDVETDRAVQVALLKVGPTGVLNQLCQIIDPGVDVPEAAARIH
GITTERARREGRDPAEVLGRVGQALEGVWRDGIPVVIMNSSFDLTLLDRELRRHHGRSLA
EADMLVLDPMVIDRELDPRRPGKRTLTALATHYRVRQEGAHDALADCLTTARIAWRLPRM
HPDWAAMGLTALQGWQADAHRRWAEDYQSYLRRRGGRPDAVIDTSWPWRPLDVTAGV
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtggcagcgcccgatggccgtgctcgatttcgagacgaccggaaccgacgtg
gagaccgaccgggctgttcaggtcgcgctcctgaaggtcggcccgaccggggtgctgaac
cagctctgccagatcatcgatccgggcgtcgacgtcccggaggcggcggcgcgcatacac
gggatcacaacggagcgtgcccgccgcgagggtcgtgatcccgccgaggtgctcggccgg
gtcggccaggcgctggagggcgtgtggcgcgacggcatccccgtcgtcatcatgaacagc
tcgttcgacctgacgctcctcgaccgcgagctgcgccgccaccacggccgcagcctcgcc
gaggctgacatgctcgtcctcgaccccatggtgatcgaccgtgagctcgatccgcgccgg
cccggcaagcgcacgctgaccgcgctcgccacccactaccgcgtccggcaggaaggcgcc
cacgacgcgctcgcggactgcctgaccacggccaggatcgcctggcgtctcccgcggatg
catcccgactgggccgcgatgggcctgaccgcgctccagggctggcaggccgacgcgcac
cgccgctgggccgaggactaccagtcgtacctgcgccgccgcggtgggcggccggacgcc
gtcatcgacaccagctggccgtggcgcccgctcgacgtcaccgcgggagtctga
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