Frankia sp. EAN1pec: Franean1_5885
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Entry
Franean1_5885 CDS
T00608
Name
(GenBank) conserved hypothetical protein
KO
K17414
small subunit ribosomal protein S36
Organism
fre
Frankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
fre03011
]
Franean1_5885
Ribosome [BR:
fre03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Franean1_5885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF2142
PMT_2
Motif
Other DBs
NCBI-ProteinID:
ABW15231
RhizoBase:
Franean1_5885
UniProt:
A8L9U3
LinkDB
All DBs
Position
7141961..7144069
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AA seq
702 aa
AA seq
DB search
MSASLAASPAGYPVGARFRPIMLLRSAPLPVWLITGLFAALLASWSVLVPQYHAPDEPNH
VDAVMRLVQGAGWPHPGHAFVRPDGVGTIAASPYGTDALPYDLDYAPIAKGDATPRADRP
TWDEMGDTRQPDGEPQPPGEIQQLVQHPPLYYWVGAAVLWALPGGDGDGLRWDVTIGILR
LMSALMVTPIPLLAWAGAHRLSDGNRVAATCAALVPLAIPQFSHIGSTVNNDNLLVLTAG
LATVTIIYVLCGDTSLRTAAWAGVFIGLALFSKSLAIVLVPMVALAYLAAWRRARRDAHA
PPALPRRGPDAPFLLAETGLMTVPPGSTRAPWRQLLLGGALMIGFGGWWWVVNAVRYRTF
QPETPGFPLGNYVNDWGDYTEILTNGTILRWWGSFGWFESNLPTEFVRSASVAVVVLFAL
AIIRGRNGRTRVNLLFLLWPTIGLFGLMTLQSALAFADHHHVSGISGRYLYAGLPSLAIG
VGMGVPAFGRRASRVFPALFFVAAATAQWWSIKTVLPYFWKPPGGDLADAWDAMTAWSPW
PPAAAVTTMWIGATFALAVLVSCVWIAFRPGPEADPDPAGSAPLGLDLADSGPAVLEPVD
SEPESSVWARPDPSDREPAPSGSTGSAPVNSGSAHSEAGPTGSARMDSAPVDSDPMDIAP
VDSTPVDTGSPESGRSQATSTSTTRSTAKGDPPSVTSPVPSH
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgcgtcgctggccgcctcccccgccggctacccggtcggagcgcgcttccggccg
atcatgctgctgcgctcggcaccgctgccggtctggctgatcaccgggctgttcgcggcg
ctgctcgcgagctggtcggtactggtgccgcagtaccacgcgcccgacgagccgaaccac
gtcgacgcggtgatgcggctggtccagggcgccggatggccgcatcccggccacgcgttc
gtccgtcccgacggggtcggcactatcgccgcgtcaccctacggaaccgacgcgctcccc
tacgacctcgactacgccccgatcgccaagggcgacgccacgccgcgcgccgaccggccg
acctgggacgagatgggcgacacccgccagcctgacggcgagccgcagccgcccggggag
atccagcagctcgttcagcacccaccgctgtactactgggtgggcgccgccgtgctctgg
gcgctgcccggcggcgacggcgacggcctgcgctgggacgtcaccatcgggatcctgcgt
ctgatgagcgcgctgatggtgacgccgatcccgctgctcgcgtgggcgggggcgcaccgg
ctcagcgacggcaaccgggtcgcggcgacctgcgccgcgctggtgcccctggcgattccg
cagttcagccacatcggatcgaccgtcaacaacgacaacctgctcgtgctgaccgcgggc
ctggccacggtgacgatcatctacgtcctgtgcggggacacgtccctgcgcacggccgcg
tgggccggggtgttcatcgggctcgccctgttctcgaaatcgctggcgatcgtgctcgtg
ccgatggtggcactcgcctacctcgccgcctggcggcgcgcccggcgggacgcccacgcc
ccacccgcgctgccgcggcgcggcccggacgccccgttcctgctcgccgagaccggtctc
atgacggtgccaccgggctcgacccgggcaccgtggcggcagctcctgctcggcggcgcg
ctgatgatcgggttcggtggctggtggtgggtcgtcaacgccgtccgctaccggaccttc
cagcccgagaccccgggattccccctcggcaactacgtgaatgactggggcgattacacc
gagatcctgaccaacgggacgatcctgcgctggtggggctcgttcggctggttcgagtcg
aacctgccgacggagttcgtccgctccgcgagcgtcgccgtggtcgttcttttcgcgctg
gcgatcatccggggacgcaacggccggacgcgggtgaatctactgttcctgctgtggccg
acaatcggcctgttcgggttgatgaccctgcagtcggcgctggcgttcgccgaccatcac
cacgtcagcgggatctcggggcgctatctgtacgcgggcctaccttcgctggcgatcggc
gtgggaatgggcgttccggcattcggccggcgggcctcccgggtctttcccgcccttttc
ttcgtggccgccgcgacggcccagtggtggtcgatcaaaaccgttcttccgtatttctgg
aagccccctggtggcgatctcgccgacgcctgggacgcaatgacggcctggtccccctgg
ccaccggccgccgccgtcaccacgatgtggatcggcgccacgttcgcgctggcagtgctg
gtgagctgcgtgtggatcgcgttccgccccgggccggaggccgacccggacccggccggc
tccgcgcccctgggcctggatctcgccgattcggggccggcggttctcgaaccggtggat
tcggagccggaaagctcggtctgggcgcgtcccgatccgtcggatcgggaaccggcgccg
tcgggatcaaccggttcggcaccggtgaactcgggatcggcgcattccgaggccggacca
accggatccgcgcgaatggactcggcacctgtggactccgaccctatggacatcgcacct
gttgactccacacctgttgacaccgggtctcccgagtcggggcgctcccaggcgacgagt
acctcgacgacgcgttccacggcaaaaggcgacccgccgagcgtgacgagcccggtgccg
tcacactga
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