Parafrankia sp. EAN1pec: Franean1_5987
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Entry
Franean1_5987 CDS
T00608
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre03420
Nucleotide excision repair
fre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Franean1_5987
03430 Mismatch repair
Franean1_5987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_5987
Enzymes [BR:
fre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Franean1_5987
DNA repair and recombination proteins [BR:
fre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Franean1_5987
MMR (mismatch excision repair)
Other MMR factors
Franean1_5987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
DUF2067
ResIII
Motif
Other DBs
NCBI-ProteinID:
ABW15331
LinkDB
All DBs
Position
complement(7295139..7297694)
Genome browser
AA seq
851 aa
AA seq
DB search
MSTLFDDTFGPGALVDGGAPAGSGDGHEPHGDLPGGGRASRGAFGPAVLEPGGATRARAP
RLDPDELLEGLNPQQRAAVVHAGSPLLVVAGAGSGKTRVLTHRIAYLLAARGARPGEILA
ITFTNKAAGEMKERVEAIVGGRARAMWVSTFHSACVRILRSEASRLGFGSSFSIYDAADA
QRLITLVTRDLDLDPKRHTARGLAAAISALKNELVDWETARDRATNHIERTVAEVYAAYQ
QRLTQANALDFDDLIMTTVNLLQAFPDVAEHYRRRFRHVLVDEYQDTNHAQYVLIRELVG
RSASSADEPAAGSGEAVYSGGSAEPDGAGWPAKAVPPSGAVPSAELCVVGDADQSIYAFR
GANIRNIVEFEQDFPNAAVILLEQNYRSTQTILSAANAVIARNAQRKPKRLWSDAGDGER
IVGFVADNEHDEAAFVAEEIDRLGDENLARPADVAVFYRTNAQSRVFEEIFIRVGLPYRV
VGGVRFYERREIRDLLAYLRVLVNPTDTVNLRRILNVPRRGIGDRAEAMVSAFAERERIA
FSEALSRVDEVPGVATRSARSIRDFVALLEGLREQLPAGPLAVIEATLERTGYLSELVAE
DTIEAQGRVENLRELVGVVQEFTERRPDGTLAEFLEQVALVADADQIPDDDGSDGVVTLM
TLHSAKGLEFPVVFLTGLEDGVFPHMRTLGDPTGLEEERRLAYVGVTRARARLYLTRSQV
RSAWGQPAYNPPSRFLGEVPDSLVEWRRLPEPAPAAGGGRFSGGGSAGAGNGSGGSGGKL
PSSPFGAKPSRPAARPIIELTPGDRVTHDTFGLGVVVTTSGVGDSRQAKVDFGAETGTKD
LLLRYAPVEKL
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgagcactcttttcgacgacaccttcggccccggggccctggtcgacggcggtgccccg
gccggctccggcgacggccacgagccgcacggtgatcttcctggcggcggtcgggcgtcc
cgtggggccttcggcccggcggtgctcgagccgggcggcgccacccgcgcccgggcgccc
aggctcgacccggacgagctgctcgaggggctcaacccgcagcagcgtgccgcggtggtg
catgccggctcgccgttgctggtcgtcgcgggtgccgggtccggcaagacccgcgtgctc
acgcaccggatcgcgtacctgctcgcggcgcgcggcgcgcggcccggcgagatcctcgcg
atcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgaggcgatcgtgggc
ggccgcgcccgggcgatgtgggtgagcaccttccactccgcctgcgtgcgcatcctgcgc
tcggaggcgagccggctcggcttcggctcctccttctcgatctacgacgcggcggacgcc
cagcgcctcatcacgctggtcaccagggatctcgacctcgatccgaagcggcacacggcc
cgtgggctcgccgcggcgatcagcgcgctgaagaacgagctggtcgactgggagacggcc
cgggacagggccacgaaccacatcgagcgcacggtcgccgaggtctacgccgcctaccag
cagcgcctgacccaggcgaacgcgctggacttcgacgacctgatcatgaccacggtcaac
ctgctgcaggcgttcccggacgtcgccgagcactaccggcgccggttccgccacgtcttg
gtggacgagtaccaggacaccaaccacgcccagtacgtgctcatccgtgagctcgtgggc
cgctcggcgtcctcggctgacgagccggctgcgggctccggcgaggctgtgtactccggc
ggttccgcggagcccgacggggcggggtggcccgcgaaggcggtgccgccgtcgggtgcc
gttccgtccgcggagctgtgcgtcgtcggtgacgcggaccagtcgatctacgccttccgt
ggcgcgaacatccgcaacatcgtcgagttcgagcaggacttcccgaacgcggcggtcatc
ctgctggagcagaactaccgctccacgcagacgatcctctccgcggcgaacgcggtcatc
gcccgcaacgcccagcgcaagcccaagcgcctgtggtcggacgccggtgacggcgagcgg
atcgtcggcttcgtcgccgacaacgagcacgacgaggccgcgttcgtcgcggaggagatc
gaccgcctcggcgacgagaacctggccaggccggcggacgtcgccgtcttctaccggacg
aacgcgcagagccgcgtgttcgaggagatcttcatccgggtcggcctgccgtaccgggtc
gtcggtggcgtccggttctacgagcgccgcgagatccgtgatcttctcgcctatctgcgg
gtgttggtgaacccgacggacacggtgaacctgcggcgcatcctgaacgttccgcggcgc
ggcatcggtgaccgcgcggaggcgatggtctcggccttcgccgagcgggagcggatcgcc
ttctccgaggcgctgagccgggtggacgaggtgcccggcgtggcgaccaggtcggcccgc
tcgatccgagatttcgtcgccctcctggagggcctgcgcgagcagctgcccgccggcccg
ctggccgtgatcgaggcgacgctggaacggacgggctacctctcggagctggtcgcggag
gacaccatcgaggcacagggccgggtggagaacctgcgcgaactcgtcggggtcgtccag
gagttcaccgagcggcgcccggacggcaccctcgccgagttcctggagcaggtggcgctc
gtcgccgatgccgaccagatacccgacgacgacggctcggacggcgtggtcacgctgatg
accctgcacagcgcgaagggcctcgagttccccgtcgtgttcctgaccgggctcgaggac
ggcgtcttcccgcacatgcgcacgcttggcgacccgaccgggctggaggaggagcgccgg
ctcgcctacgtgggcgtcacccgggcccgtgcgaggctgtacctcaccaggtcccaggta
cgcagcgcctgggggcagccggcctacaacccgccgtcccggttcctgggggaggtgccg
gactcgctcgtggagtggcggcggctgcccgagcctgccccggccgcgggcggtgggcgg
ttctccggcggtgggtcggcgggcgcgggcaacggttccggtgggtccggcgggaagctg
ccgagctccccgttcggggcgaagcccagccgcccggcggcgcgtccgatcatcgagctg
acccccggcgaccgtgtcacccacgacacgttcggtctcggtgtggtcgtcacgacgagc
ggggtgggggactcgcgccaggccaaggtcgacttcggcgccgagaccggcacgaaggac
ctcctcctgcgctacgccccggtcgagaagctctag
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