Parafrankia sp. EAN1pec: Franean1_6078
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Entry
Franean1_6078 CDS
T00608
Name
(GenBank) thiamine pyrophosphate protein domain protein TPP-binding
KO
K00175
2-oxoglutarate/2-oxoacid ferredoxin oxidoreductase subunit beta [EC:
1.2.7.3
1.2.7.11
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00010
Glycolysis / Gluconeogenesis
fre00020
Citrate cycle (TCA cycle)
fre00620
Pyruvate metabolism
fre00650
Butanoate metabolism
fre00720
Other carbon fixation pathways
fre01100
Metabolic pathways
fre01110
Biosynthesis of secondary metabolites
fre01120
Microbial metabolism in diverse environments
fre01200
Carbon metabolism
fre01210
2-Oxocarboxylic acid metabolism
Module
fre_M00009
Citrate cycle (TCA cycle, Krebs cycle)
fre_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Franean1_6078
00020 Citrate cycle (TCA cycle)
Franean1_6078
00620 Pyruvate metabolism
Franean1_6078
00650 Butanoate metabolism
Franean1_6078
09102 Energy metabolism
00720 Other carbon fixation pathways
Franean1_6078
Enzymes [BR:
fre01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.7 With an iron-sulfur protein as acceptor
1.2.7.3 2-oxoglutarate synthase
Franean1_6078
1.2.7.11 2-oxoacid oxidoreductase (ferredoxin)
Franean1_6078
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GFIT
Motif
Pfam:
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
ABW15422
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All DBs
Position
7397810..7398871
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AA seq
353 aa
AA seq
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MTVTTNGSGITNRLLDLVPATPSQLSRKDFTSDQEVRWCPGCGDYAILATVQGFLPELGI
ARENIAFISGIGCSSRFPYYLQTYGMHSIHGRAPAIATGLATSRPDLSVWVVTGDGDALS
IGGNHLLHAMRRNVNIKILMFNNRIYGLTKGQYSPTSEVGKITKSTPFGSLDRPYNPASL
ALGAEATFVARSIDSDRAHLTSVLRAAAEHPGTAFVEIFQNCNIFNDGAFEALKDRGTRD
DATLKMIDGEPLVFGAERDKGIRRSASGGLEVCAATDEGVIVHDAASTDPSQAFALSRLT
GDDHGVTPIGVFRNVDIPTYDEALNAQVEQTRERQGTGDLMALISGGETWTIS
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgtcacaacgaacggcagcgggattaccaaccgactcctggacctggtacccgcc
acgccgagccagctgagccgtaaggacttcacctccgaccaggaggtccggtggtgcccg
ggatgcggcgactacgccatcctggccaccgtccagggcttcctgcccgagctggggatc
gcccgggagaacatcgccttcatctcgggcatcgggtgctcctcacgcttcccgtactac
ctgcagacctacgggatgcactccatccacgggcgggcgccggcgatcgcgacgggcctg
gcgacgtcccgcccggacctgtcggtctgggtggtcaccggtgacggcgacgcgctctcg
atcggcgggaaccacctgctgcacgcgatgcgccgcaacgtgaacatcaagatcctgatg
ttcaacaaccggatctacgggctgaccaagggccagtactccccgacgtccgaggtcggc
aagatcaccaagtcgacgccgttcggctcgctcgaccgcccgtacaacccggcgtcgctg
gcgctgggcgcggaggcgacattcgtcgcccggtcgatcgactcggaccgggcccacctg
acgtcggtgctgcgcgcggcggcggagcacccgggcaccgcgttcgtggagatcttccag
aactgcaacatcttcaacgacggtgcgttcgaggcgctgaaggaccgcggcacccgcgac
gacgccacgctgaagatgatcgacggcgagccgctggtcttcggcgccgagcgggacaag
ggcatccggcgctcggcgtccggcggcctcgaggtctgcgcggcgaccgacgagggcgtc
atcgtgcacgacgcggcgagcacggacccgagccaggcgttcgcgctgtcccggctgacc
ggggatgaccacggcgtcaccccgatcggcgtgttccgcaacgtcgacatcccgacctac
gacgaggcgctcaacgcgcaggtcgagcagacccgggagcggcaggggacgggggacctc
atggccctcatctccggcggcgagacctggacgatcagctga
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