Parafrankia sp. EAN1pec: Franean1_6413
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Entry
Franean1_6413 CDS
T00608
Name
(GenBank) ABC transporter related
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Franean1_6413
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_6413
Transporters [BR:
fre02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Franean1_6413
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
ABC_ATPase
FKS1_dom2
DUF87
Zeta_toxin
nSTAND1
AAA_21
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABW15750
LinkDB
All DBs
Position
complement(7786596..7788329)
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AA seq
577 aa
AA seq
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MLTRLLRNHLPPYSRPIALLVVLQLTATLAMLYLPTLNADIIDNGVVPGDTGYIVRLGGI
MLGVTFLQAVCSAAAVFFGARTAMGVGRDIRAAVFDQVQSFSAREVGRFGAPSLITRATN
DVQQIQMLVLMAFTMMISAPIMCLGGIALAVHQDAGLSLLLVAIVPFLAAMITLLVRRMQ
PLGRKMQERLDEVNRILREQITGLRVIRAFVRDDHEKRRFGTANADLTDVSLRFGRIMAL
LFPLVMAAVNVSSIAVIWFGAHRIDDGAMEIGALTAFLSYLMQILMSVMMATFMFSMIPR
AEVCAERIQEVLGTESTLRPPADPVRTLPRRGELELRDVMFSYPGAEAAVLRGVSVRARP
GRTTAIIGSTGSGKSTLLGLVPRLSDVSEGAVLIDGVDVRDIDPKLMAETVALVPQKPYL
FTGTIASNLRYGDPEATDTELWRALDIAQARDFVEAMPDGLDTPIAQGGTNVSGGQRQRL
AIARALVRRPDIYLFDDSFSALDYATDAALRAALARETAGATMVIVAQRVATIRDADQII
VLDDGQVVGTGTHRELLAGNDTYREIVFSQLTEEEAA
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaggctgttgcggaaccacctacccccctactcgcggccgatcgcgctgctg
gtcgtgctgcagctgaccgcgaccctggccatgctctacctgccgaccctgaatgccgac
atcatcgacaacggtgtggtgccgggcgacacgggttacatagtccggctcggcgggatc
atgctcggggtgaccttcctgcaggccgtctgctcggccgcggcggtgttcttcggcgcg
cgcaccgcgatgggagtcggccgcgacatccgggccgcggtgttcgaccaggtccagtcg
ttctcggcccgcgaggtcggccgcttcggcgcgccgtccctgatcacccgggcgacgaac
gacgtccagcagatccagatgctggtgctgatggcgttcaccatgatgatctccgcgccg
atcatgtgcctgggcgggatcgcgctggcggtgcaccaggacgccggcctctcgctgctg
ctcgtcgcgatcgtgccgttcctcgcggcgatgatcaccctgctggtccggcggatgcag
ccgctgggccggaagatgcaggagcgtctcgacgaggtcaaccgcatcctgcgcgagcag
atcaccggcctgcgggtgatccgcgccttcgtccgggacgaccacgagaagcgccgtttc
ggcaccgccaacgccgacctcacggacgtctccctgcgcttcggtcggatcatggcgctg
ctgttcccgctggtgatggcggcggtgaacgtctcgagcatcgccgtgatctggttcggc
gcgcaccggatcgacgatggtgcgatggagatcggggcgctgacggccttcctcagctac
ctgatgcagatcctgatgtcggtcatgatggccaccttcatgttctcgatgattccgcgg
gccgaggtgtgcgcggagcgcatccaggaggtgctggggacggagtcgacgctgcgcccg
cccgccgacccggtgcgcacgctgccgcgccgcggcgagctggagctgcgcgacgtcatg
ttcagctacccgggtgccgaggcggcggtgctgcgcggggtcagcgtgcgcgctcgcccc
gggcggaccaccgcgatcatcgggagcaccggcagcggcaagtccacgctgctcggcctg
gtcccgaggctgtccgacgtctccgagggcgccgtcctgatcgacggggtggacgtccgc
gacatcgacccgaagctgatggccgagaccgtcgccctcgtcccgcagaagccgtacctg
ttcaccgggacgatcgcgtccaacctgcgctacggggatcccgaggccaccgacaccgag
ctgtggcgcgccctggacatcgcccaggccagggacttcgtcgaggcgatgcccgacggg
ctggacaccccgatcgcccagggcgggacgaacgtctccggcgggcagcgccagcggctc
gcgatcgcccgggcgctggtccggcgtccggacatctacctgttcgacgactcgttctcg
gcgctcgactacgcgaccgacgccgccctgcgcgcggcgctcgcgcgcgagacggccggt
gccacgatggtgatcgtcgcccagcgggtggcgaccatccgcgacgccgaccagatcatc
gtgctggacgacggccaggtcgtgggcacgggaacccatcgcgagctgctggcgggcaac
gacacctaccgggagatcgtcttctcgcagctcaccgaggaggaggcggcatga
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