Frankia sp. EAN1pec: Franean1_6600
Help
Entry
Franean1_6600 CDS
T00608
Name
(GenBank) transcriptional activator domain
Organism
fre
Frankia sp. EAN1pec
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
BTAD
WD40
Trans_reg_C
PD40
AAA_16
Proteasome_A_N
Cytochrom_D1
Motif
Other DBs
NCBI-ProteinID:
ABW15937
RhizoBase:
Franean1_6600
UniProt:
A8KYE7
LinkDB
All DBs
Position
complement(8029777..8034978)
Genome browser
AA seq
1733 aa
AA seq
DB search
MAREDADAPAGRTWRATEPGGLTVVPRQPAPDTGSVAFPGLWFGVLGPLEVRSDGRPLAL
RGPRERALLGLLLAERNRAVSVSRLVDGIWGAVPPPTAEKTLQSHISRLRRLLEPERPPA
GWTVLVTVPSGYSLRADLTALDSALFEQLVEQARRAFAVGAPELARARFRRALGLWRGDA
YEDLLDLEFAAAERDRLVELRLAAVADQIDAEFALGRSAAVFGELQRLVAAHPLRERFRS
QLMIALYESGRQADALEAYRSARARLVAEIGVEPGRQLRALNAAILEEQPSLLPDIVQPQ
RLPAALGVDRRALIGRDVEMRWLERVWDCVLDDRGEVVVVRGEPGMGVRRLVAEFARRVA
GRGAAVVLGPIDTGTLTGIAQERPVLMVVDVDDDQPDTSPGWAAVQASAVARLPVLVVVT
ARPGDGPPEVRPGGFDVGAQSVLQLGPLGSAQVTEIVAGYVGAGEVPAATAAVIESSGGV
PARVHADAADWAAVRAGERVGQRAARVATDRYDLAESERAMVSDVLDLQRVRRRRGVAGP
AGSVGGTGASGGPSASGSSAGGAGSGDAADFGAPVGAPGTVVCPYKGLARFDEQDAAYFF
GRERLIAQLVTRCVAAPLLAVVGASGSGKSSVVRAGLVPAIRSGVLPGSDRWRIRLLRAG
TVEATSLDVDMDLDGDGDGAGGNELLILDQFEEVFTTRSQDSQTRLIDQLVDTLERGDGR
LRVVLTVRADYYGRFAAHPTLARLVADNSVLVGPMVVDELRRAIEEPALVAGLELEEGLT
AAVLADARQEPGVLPLLSTALLATWEGRDGRTLRVATYREAGGVAGTLTRLADGMYESLD
AAGQAIVRQLFLRLATLGEDGDDLRRRAPRSELVGSAPVEAVLTVLIARRLVIAADDTVE
VAHEALLREWPRLRGWLETDRDGRRVHRELSGAAVAWDAGGRNPADLYGGPRLAAAQDWA
AAHPRDANPLEEEFLAAAGAARDRAAQVARRTTQWLRTLAAGLAVLLVVALIATGVAVGQ
RHRATLQADRAHSEAELARASRLAAVTRTLGPDQIDLALLLGVESYRQQPTVETEGNLET
ALVHTPPGLTQLIRFRSPSFYPSVSPDGRLLASPGQDGTVDLWDLQAGRLLRTFTWPTAR
QVAMFSSDGKLLTAGGNDGTVVVWDAVTGRQVGAPVKVAGGFVYGEFDPTDPSRLFAVSD
TGEVAIWDRAIPDRPVQLGPPLRFTPRAGALPVAVVSADGRRLAAGTSSPDSSTRVWDLG
SRTVIRDLPGLTGSFSPDGRSLATASDGRVEVWDVASGDRRGVPLTGLTGALPGILFSPD
GQLVAAGDGGNVVRVFDLASGLQIGASLALHTGGPALPTAFLPDGRVVTSGPHEAAVWQV
GRTTPPIGLVLGGHQGLTFGTFVPGGQEVVTRGISDSGLRRWDAGTGRELGRLLDGRVQA
PVTFSPDGRLLATAGADDNQLALWDARTGERLAGLDGTRGGRRSYADWSPAGDRIVTGAD
GSVRIWDVSDPRHPASVEQLDPDGEPHPGTPDSQWPVFSHDGQWIAVHDFPGHTMTVFDA
ASGRKQWSTSAPVADLAGIAFAPDDKTLAISYGARVGGRVSFHDTGTGHVERTLQIPSGG
GIEFLRGGSVVMTTGDSAGSSAAQLWDAATFAPIGEPLPQPEPGAYFISRDAEGTRAVAG
SQNSFAVIWDVDTARWQTVACGIAGRNLTRAEWDQYFPNRPYRQTCPQWPAGS
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggaggatgccgacgcgccggccgggcggacctggcgggctacggagccgggc
gggttgacggtcgtgccacgccaacccgccccagacaccggcagtgtcgctttccccggt
ctgtggttcggcgtgctcgggccgttggaggtgcgtagcgacggtcgcccactggcgctg
cgggggccgcgagaacgtgcgttgctgggcctgttgctggcggaacgtaatcgggctgtt
tcggtctcgcggctggttgacggaatttggggggcggtgccgccgccgacggccgaaaag
acgctgcagagccatatttcccgattgcgtcgtcttctggagccggaacgcccgccagcg
ggttggacagtactggtgacggtgccttccgggtacagcctgcgggccgacttgactgcc
cttgactcggcattgttcgaacaactcgtggaacaggcgcggcgggcttttgcggtcggt
gctcctgaacttgcccgcgctcggttccggcgggcgctgggattgtggcggggggacgcg
tacgaggatcttctcgacctcgagttcgcggcggcggaaagggaccggcttgtcgaactg
cggctggccgcggtagcggatcagatcgacgccgagttcgcactcggccggtcggcggca
gtattcggtgagctgcagcggttggttgccgcccatccgttgcgggagcgattccgtagc
cagctgatgatcgcgctgtacgaatcgggccgccaggccgacgcgctggaggcctaccgg
tcggcgcgggcccggctggtggcggagatcggcgtggagccgggccggcagcttcgagcg
ttgaacgcggccattctcgaggagcagcccagcctgctcccggacatcgtgcaaccgcag
cgccttccggcggcgttgggtgtcgatcgccgtgcattgatcggtcgggacgtggagatg
cgctggctcgagcgcgtctgggactgcgtcctcgacgaccgcggtgaggttgtcgtcgtc
cgcggcgagccaggaatgggtgtccgccgcctcgtcgccgagttcgcccgccgggtcgcg
ggccggggtgccgcggtcgtcctcggaccgatcgacaccgggactctgacggggatcgca
caggagcgccccgtgctcatggtcgtcgacgtcgacgacgaccagccggacaccagcccg
ggctgggccgcggtgcaggcctccgcggtcgcgcgcctgccggtgctcgttgtcgtcacc
gcccgacccggcgacggcccgccggaggtacggcccggcgggttcgacgtcggcgcgcag
tcggtcctgcagctcggcccgctcgggtcggctcaggtcaccgagatagtggctggctac
gtcggtgcaggcgaggtgccggccgcgaccgcggctgtgatcgaatcctccggcggcgtc
ccggcccgggtgcacgcggatgcggccgactgggcggccgtccgagccggcgaacgggtc
ggtcagcgggcggcgcgggtcgcgaccgatcgatacgacctggccgagtcggaacgcgcg
atggtgtctgacgtgctcgacctgcagcgggttaggcgtcgtcgtggcgtcgccggtccg
gccggatccgtcggcggcacaggagcctcgggcggcccgagcgcgtcgggcagctcagct
ggcggcgccggctcgggtgatgcggccgacttcggcgctccggtcggcgcgccggggacg
gttgtctgcccgtacaaggggctggcgcgttttgacgagcaggacgctgcctatttcttt
ggccgggagcggctgatcgcgcagctcgtgacccgctgcgtcgcggcaccgctgctggcg
gtggtgggtgcgtcgggaagcgggaaatcgtcggtcgtgcgcgctggactggtgccggcg
atccgctccggcgtactgccgggaagcgaccgatggcggatccggctgctgcgggccggc
accgtcgaggcgacctcgctggacgtcgacatggacctcgatggcgatggcgacggcgcc
ggtggcaacgagctgctcattctggatcagttcgaggaagtgttcaccacacggtcgcag
gacagccagacccgtttgatcgaccagctggtcgacacgctggaacggggcgacggccgg
ctgcgcgtcgttctcaccgtgcgggccgactactacggccggttcgccgcccacccgacg
cttgcccgcctggtcgctgacaacagcgtgctcgtcggtccgatggtcgtcgacgagttg
cggcgcgcgatcgaggaacccgcgctggtcgccgggctggaactcgaggaggggctcacg
gcggcggtactggccgacgcccgtcaggagcctggcgtgttgccgctgttgtcgacggcg
ctgctggcgacgtgggaagggcgcgacggccggacgttgcgcgtagccacctaccgtgag
gccggcggtgtggccggaacgctgaccaggcttgccgacggtatgtacgagagcctcgac
gccgctggtcaggcgatcgtgcggcagctgtttctgcgcctcgcgacgctgggcgaggac
ggcgacgatctgcggcgtcgcgcgccacgctccgagctggtaggcagcgcgccggtcgag
gccgttctcacggtgctgatcgcgcgacggctggtcatcgccgcggacgacacggtcgag
gtcgcgcacgaggcgttgctaagggagtggccccggctgcggggttggctcgagacagac
cgcgacggccgccgggtgcaccgcgaactgagcggggcagccgtggcgtgggacgccggc
gggcggaacccggccgacctttacggcggtccccggctggccgccgcacaggactgggcc
gcggcccacccacgcgacgccaaccccctggaggaggagttcctcgcggccgctggtgcc
gcccgggatcgggcggcacaggtcgctcgacggaccacccagtggctgcggacgctcgcc
gccgggttggccgtgctcctggtggtcgcgctgatcgcgacaggggtggccgtcgggcag
cggcacagggccacgctgcaggccgatcgggcacacagcgaagcggagctggcgcgggcg
agccggctcgcggcggtcacccgcacccttggccccgaccagatcgaccttgccctgctg
ctgggcgtcgagagctaccggcaacagcccacggtcgagaccgagggaaatctcgagacc
gcgctcgtccacaccccgcccggcctcactcagctgatccgtttcaggtcgccgagtttc
tacccgtcggtgagcccggacggacgactgctggcctcgcccggccaggacggcacggtc
gacctgtgggatctgcaggccggccggctgctgcgcacgttcacctggcccaccgcacgc
caggtcgccatgttcagctcggacgggaagctgctcaccgccggggggaacgacgggacc
gtcgtcgtctgggacgccgtcaccggacggcaggtcggggcaccggtcaaggtcgccggc
ggcttcgtgtacggcgagttcgaccccactgacccatctcgccttttcgctgtcagcgac
accggcgaggtcgccatctgggaccgggccatcccggaccggccggtgcagctcgggccg
ccgctgcggttcacgccgcgggccggcgcgctcccggtggcggtcgtcagcgctgacggc
cgtcgcctggcggccgggacgtcgtcccccgacagctcgacgcgggtgtgggatctgggc
tcccgcaccgtgatacgggaccttcccggcctcaccggatccttcagcccggacggccga
tcgctggctaccgcgtccgacggtcgggtcgaggtgtgggacgtcgcctccggagaccgg
cggggcgtgccgctgacgggactgaccggagcgttgccaggaatcctcttcagtccggat
gggcagctcgtggccgccggcgacggaggcaacgtcgtccgggtgttcgacctggcctcg
ggactgcagatcggcgcttccctcgccctgcacactggcggtccggcgctccccaccgcc
tttcttcccgacggccgggtcgtcaccagtgggccgcacgaggccgcggtctggcaggtg
ggtcgtacgacgccgccgatcggcctggtgctcggaggccatcagggtctgacgttcggc
acgttcgtcccgggtggccaggaggttgtcacccgcggcatctccgacagcgggctacgg
cgatgggacgccggcaccggaagggaactcggccggctgctcgacggccgggtccaggca
cccgtgacgttcagccccgacggccgtctgctcgccacggccggtgccgacgacaaccag
ctcgcgctgtgggacgcgcgcaccggcgaacgactcgccggactcgacggaacccgcggc
ggacgacgcagctacgcggactggagcccggccggagaccggatcgtgaccggcgccgac
gggtcggtgcggatctgggacgtcagcgacccccgccatccggcatcggtcgagcagctg
gacccggacggcgagccccatccgggcaccccggacagccagtggccggttttcagccat
gacgggcagtggatcgcggtccatgactttccgggtcacacgatgacggtgttcgacgcg
gcgtcaggtcgcaaacagtggtcgacatcggcgcccgtggcggacctggcgggaatcgcc
ttcgcgccggacgacaagactctcgcgatcagctacggcgcccgggtcggtggtcgagtc
tcgttccacgacaccgggaccgggcacgtggagcggaccctgcagatcccgagtggaggc
ggaattgagttcctccggggtggcagtgtcgtgatgacaacgggcgattcggctggtagc
agcgctgcgcagttgtgggacgcggccaccttcgcaccgatcggggagccgctgccgcaa
cccgaaccgggcgcgtacttcatctcccgtgacgccgagggcacccgagcggtggctggc
tcgcagaactcgttcgcggtgatctgggacgtcgacaccgcacggtggcagacggtcgcc
tgcggaatcgctggacgcaacctcacccgggcggaatgggatcagtactttcccaaccgg
ccgtacaggcagacctgtccgcagtggccggcgggttcatga
DBGET
integrated database retrieval system
