Parafrankia sp. EAN1pec: Franean1_6672
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Entry
Franean1_6672 CDS
T00608
Name
(GenBank) RNA binding S1 domain protein
KO
K06959
protein Tex
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Franean1_6672
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tex_central_region
Tex_YqgF
Tex_N
HHH_3
HHH_9
S1
HHH_7
S1_RRP5
YqgF
T2SSK
HHH_6
ALIX_LYPXL_bnd
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ABW16009
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Position
8102830..8105535
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AA seq
901 aa
AA seq
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MSVSETVSVQARIAAELGVREGQVASAIDLLDGGATVPFIARYRKEVTGALDDAQLRTLE
ERLRYLRELAERRAAILESIRSQGKLDDALEAQIMAADTKARLEDIYLPYKPKRRTKAQI
AREAGLEPLADALLADRSLDPRAEAERYVDAEKGVADATAALEGARAILVERFAEDADLI
GALREQMWSRGYLVSRVREGKESDGAKFADYFDFAEPFTKLPSHRILAMFRGEKEEILDL
TLEPDAPADPAEPPAPGPTDYERRIAERFDIADAGRPADRWLLDAVRWAWRTRVLVHLGV
DLRMRLWTSAEDTAVRVFAANLRDLLLAAPAGQRRTMGLDPGFRTGVKVAVVDATGKVVA
TDTIYPHVPARRWDDSVASLARLSAEHGVELIAIGNGTASRETDKLADDLIRRHPELKLT
KVMVSEAGASVYSASAYASQELPSMDVSLRGAVSIARRLQDPLAELVKIDPKSIGVGQYQ
HDLAEARMSSSLDAVVEDCVNAVGVDVNTASAPLLSRVSGISGGLADNIVRHRDSNGPFR
SRTGLLDVARLGPKAFEQCAGFLRITGGDDPLDSSSVHPESYPVVRRILTVTGGDLRALI
GDTKTLRSLKPTEFVDDTVGLPTVTDILAELEKPGRDPRPAFRTAEFTEGVETLADLVPG
MILEGVVTNVAAFGAFVDIGVHQDGLVHVSAMSKNFVSDPREVAKPGDIVRVKVLDVDIP
RKRISLTLRLDDEPGAADAGGGQSGQGGQGGERRAGRGGRGGQNRGGAGGAGGAGRSQER
DGGQPADQQGGRQAAAAGGGQPAGGQPGGGRGGPGQRGGPGQRGGPGQRGGGGGAGQRGG
AGGAGGGQRGGGGGQRGAGHRGGRTDGAIADALRRAGLVTGDEVTLGGKQDDSRDSRRGR
R
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgtctcggagacggtgtctgtccaggcgcggatcgccgcggagctgggcgtgcgc
gaggggcaggtggcctcggcgatcgacctgctcgacggcggtgcgacagtgccgttcatc
gcccggtaccgcaaggaggtgaccggcgccctcgacgacgcgcagctgcgaaccctggag
gagcggctgcggtacctgcgggagctggcggagcggcgggcggcgatcctggagtccatc
cggagccagggcaagctggacgacgccctcgaggcgcagatcatggccgccgacaccaag
gcccgcctcgaggacatctacctcccctacaagccgaagcgccggacgaaggcgcagatc
gcgcgtgaggccgggctggagccgctcgcggacgcgctgctggccgaccgctcgctcgac
ccccgggcggaggcggagcgctacgtcgacgccgagaagggcgtcgcggacgccacggcc
gcgctcgagggcgcccgcgccatcctggtggagcgcttcgcggaggacgccgacctgatc
ggtgccctgcgcgagcagatgtggtcccgtggttatctcgtcagccgggtccgcgagggc
aaggagtccgacggcgcgaagttcgccgactacttcgacttcgccgaaccgttcacgaag
ctgccgtcccaccggatcctcgcgatgttccgcggtgagaaggaggagatcctcgacctc
accctggagccggacgcgcccgccgacccggccgagcccccggcccccggccccaccgac
tacgagcggcgcatcgccgagcgtttcgacatcgccgacgccggccggccggccgaccgc
tggctgctcgacgcggtgcgctgggcctggcggacgcgggtcctggtccatctcggcgtc
gacctccgcatgcggctgtggacgtccgccgaggacaccgcggtgcgcgtgttcgcggcg
aacctgcgtgacctgctgctcgccgcccccgccgggcagcggcgcaccatgggcctcgac
ccggggttccgtaccggcgtcaaggtggcggtcgtcgacgcgaccgggaaggtcgtcgcc
accgacacgatctacccgcacgtcccggcccgccgctgggacgactcggtggcctcgctg
gcgcggctgtccgccgagcacggcgtcgagctgatcgccatcggcaacgggacggcctcc
cgggagaccgacaagctggccgacgacctgatccgccggcatcccgagctgaagctgacc
aaggtgatggtgtcggaggccggtgcctccgtgtactccgcctccgcctacgcgtcccag
gaactgccttcgatggacgtctccctgcgcggcgcggtgtccatcgcgcgccgcctgcag
gacccgctcgccgagctcgtcaagatcgaccccaagtcgatcggggtcgggcagtaccag
cacgacctggccgaggccaggatgtcgtcctccctggacgccgtcgtcgaggactgtgtg
aacgcggtcggggtggacgtcaacaccgcctcggcgccgttgctctcccgggtctccggc
atcagcggcgggctggccgacaacatcgtccgccaccgtgacagcaacggcccgttccgg
tcgcggacggggctgctggacgtggcccggctgggcccgaaggcgttcgagcagtgcgcc
ggcttcctgcgcatcaccggcggcgacgacccgctggacagctccagcgtgcacccggag
tcctacccggtagtccggcggatcctgacggtgaccggtggcgacctgcgcgcgctgatc
ggcgacacgaagacactgcgctcgctcaagcccaccgagttcgtcgacgacacggtcggc
ctgccgacggtgaccgacatcctcgccgagctggagaagcccggccgcgacccgcggccg
gcgttccggacggccgagttcaccgagggcgtcgaaaccctcgccgacctggtgccgggc
atgatcctcgagggcgtggtgaccaacgtcgccgcgttcggcgccttcgtcgacatcggc
gtgcaccaggacggcctcgtccacgtctcggcgatgtcgaagaacttcgtcagcgacccc
cgtgaggtcgccaagcccggggacatcgtgcgggtgaaggtcctcgacgtcgacatcccg
cgcaagcggatctcgctcacgctgcgcctcgacgacgagccgggcgcggcggacgccggc
ggcgggcagagcggtcagggtggccagggcggtgagcggcgcgcgggccgcggcggccgc
ggcgggcagaaccgcggtggcgccggtggcgccggtggcgccggccggagccaggagcgc
gacggcgggcagcccgccgaccagcagggcggccggcaggcggcagcggccggcggcggg
cagccggccggcggccagcccggaggcgggcgtggcggtccggggcagcggggcggcccc
ggccagcgcggtggtccgggccagcgcggtggcggtggcggtgcgggtcagcgcggcggt
gccggtggcgcgggtggcggtcagcgcggtggcggcggtggccagcgcggcgccggtcac
cgcggcgggcggaccgacggggccatcgccgacgcgctgcgccgcgccggtctggtgacc
ggcgacgaggtcaccctcggcggaaagcaggacgacagccgggacagccgccgcgggcgc
cgatag
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