Parafrankia sp. EAN1pec: Franean1_6796
Help
Entry
Franean1_6796 CDS
T00608
Name
(GenBank) transcriptional regulator, putative ATPase, winged helix family
Organism
fre
Parafrankia sp. EAN1pec
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_16
BTAD
Trans_reg_C
AAA_22
DUF8739
CcmD
AAA_30
TPR_1
BrxC_BrxD
HTH_20
PH_FT_C
Motif
Other DBs
NCBI-ProteinID:
ABW16130
LinkDB
All DBs
Position
complement(8282488..8285844)
Genome browser
AA seq
1118 aa
AA seq
DB search
MAMSLRPVRAGSPEQPSPGRNLCLQILGPLRIWRGGVELDAGPRQQACLLALLLIRAGRP
ISTSELIDLIWDDDVPASAVNILQKYVGTLRRLLEPALPARGTGSYLQRRGNGYLFSADP
GMLDVVTFREIAGKARTCLAEQRLDAALDCYVQALALWHGPAGGGLTHGSTAVSLFAAIN
DEFFDACVPAAELAVTLGQPELVLQPLRLAAWMAPLHEIVQASLVFTLAAAGQQAEALSV
FGTVRARLAEELGIDPGPALRAAHLRVLGHPPTSAASAGADDDGPAATAGAPAGGHAGGP
LPGQPPTELPTLVGSAGKPSAEQPRAPSLETPTADGMIGRAEELAVLRHAVDSVFAGGTG
LVVVEGEPGVGKTRLLEEAGAEADRRGALVVWGRCLEGDGTPSMWPWVQAVGTVLDSLPA
AAREEWHAGELGRLVEPRGGVPATPVLPDSGAQFRLFERVVALVGQVSARRPVVLVIDDL
QWADVASLQMFSHLAARPPGGAVITGALRDRVPVPGSELARMLAAASRLPRHRRIRLGPL
DAAEVAELVRRETGQTPDVGVTQSIHVRTAGNPFFVRELSRLLADSGVLTEDAAARAGVP
STVRDVVRDRMAGLDDDTGGLLQIAALIGREIDLGLLARAADLDAQTCSERLEPLEALGL
LEPTPGDPFSFRFAHDLVRESVVRTTPPLRATRLHLRVADALERSDTGGESVAERLAHHL
WAAGPLADPARTSSALERAGRRAAAKSAFEAAARQLVSAAQVARTASMSERELSALSQLT
AVVGMRSGYVGSAVDLLERAEELARDLGREREAADFLFSRWAACSQGIQLDRAGRLARRL
LDQGEASADPVVRAYGRHAWGIHQWDVGNIGEAFRYLSQSNSIMFDGLAQREDDPLRHDL
QLLSPVMLALNTALHGDVDGARALLDRLEAAARGDSYAITVWAAFAVTVAALAGDPAWAL
RAAERGIAVDPEHSFVFLGSYQRLARCWARAVTGEDPAGAATEAKMIIAATLLDPPRSGL
ATWYGLLAEMWLAAGMPAEATATLDRADSFLDTYGQRYPEGLILLLRARMMQARGEPTAA
VQAAVERARALSVEREAHLFAHRAEELSAGLATEPAGH
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
gtggccatgtcattgcgtcctgtccgtgccggtagccctgaacagccgtctcccggcagg
aatctttgcctccagattctcggtccgttgcggatctggcggggcggcgtcgagctggac
gccgggccccggcaacaggcctgcctgctcgctctgctcctcatccgggcgggccggccg
atcagcacgagcgagctgatcgacctgatctgggacgacgacgtcccggcatcggctgtc
aacatcctccagaaatacgtcggcacgctgcggcgattgctggagcccgcgctgccggcc
cgcggaaccggctcgtacctgcagcgccgcggcaacggttacctgttttcggccgacccc
ggcatgctggacgtcgtcaccttccgggaaatcgccggaaaggccaggacatgcctcgcg
gagcagcgcctcgatgcggcgctcgactgctacgtacaggcgctggcgctctggcacggc
cccgcgggtggcgggctgacccacggatcgaccgccgtgtcgctcttcgccgcgatcaac
gacgagttcttcgacgcatgcgtaccggcggccgagctcgcggtgacgctgggccaaccc
gagctcgtgctccagcccctgcgcctggccgcctggatggcgccgttgcacgaaatcgtg
caggcaagccttgtcttcaccctggccgcagccggtcagcaggctgaggcgctgtcagtg
ttcgggacggtccgcgcccggctcgccgaggagctcggcatcgatcctgggcccgcgctg
cgggccgcgcacctgcgggtccttggccatccaccgacctcggcggcctcggccggcgcg
gacgacgacgggccggcggcgacggcgggcgcgccggcgggcgggcacgcaggcgggccg
ctgccagggcaaccaccgaccgagctgcccacgctcgtcggcagcgccgggaagccgtcc
gccgagcagccgcgggctccttccctcgagacacctaccgccgacggcatgatcggccga
gccgaggagctcgcggtgctgcggcacgcggtggactcggtgtttgccggcggcaccggg
ctcgtcgtcgtcgagggcgagccgggggtgggcaagacgcgcctgctggaggaggccggc
gcggaggcggacaggcgcggcgcgctcgtcgtctggggccgctgcctggaaggcgacggg
acgccgtcgatgtggccgtgggtgcaggcggtcggcacggtcctcgacagcctgcccgcc
gcggcgcgggaggagtggcacgccggcgaactcggccgcctcgtggagccgcgcggcggc
gttcccgccacgccggtgctgccggacagcggcgcccagttccgcctgttcgaacgggtt
gtcgccctcgtcggccaggtctcggcgcggcggccggtggtgctcgtgatcgacgatctc
cagtgggcggacgtcgcctcgctgcagatgttcagtcacctggcggcacgcccgccgggc
ggcgctgtgatcaccggcgcgctccgcgaccgtgtgcccgtgcccggctcggagctggcg
cggatgctcgccgccgcgagccggctgccccggcaccgccggatccggctcggcccgctc
gacgcggccgaggtggccgagctcgtccgccgcgagaccggtcagacccccgacgtcggt
gttacccaaagcatccatgtccgcactgccggcaaccccttcttcgtgcgggagctgtcc
cggctcctcgccgacagtggggttctcactgaggatgccgcggcgcgggccggtgtgccg
tccaccgtgcgggatgtcgtccgcgaccggatggcgggccttgacgacgacaccggcggc
ctgttgcagatcgccgcgctcatcggccgggagatcgacctcggcctgctcgcacgcgcg
gccgaccttgacgcgcagacctgcagcgagcgcctcgagcccctggaggcgctcggcctg
ctcgagcccacgcccggggacccgttctcgttccgcttcgcgcacgacctggtccgggag
tcggtcgtccggacgacgccgccgctgcgcgcgacccggctgcacctgcgcgtcgccgac
gcgctggagcgctccgacaccggcggcgagtccgtagccgagcgcctcgcccaccacctg
tgggccgccggcccactcgcggacccggcccggacctcgagcgcgctggagcgcgccggg
cgccgcgccgcggccaagtccgcgttcgaggccgccgcacggcagctggtgtcggccgcg
caggtggcgaggacagcgagcatgtcggagcgggagctgtccgccctgtcgcagctcacc
gcggtcgtcgggatgcggtccgggtacgtcggctccgcggtcgacctgctggagcgggcc
gaggagctggctcgtgacctcggccgggaacgggaggccgcggacttcctcttctcccgc
tgggccgcgtgctcccagggcatccagctcgaccgcgccggccggctggcgcgccggctg
ctcgatcagggcgaggcgtccgccgacccggtcgtgcgtgcctacggccggcacgcctgg
ggcatccaccagtgggacgtcggtaacatcggcgaggcgttccggtatctgagccagtcc
aactcgatcatgttcgatggcctggcccagcgcgaggatgatccgctccggcacgacctg
cagctgctctcgcccgtgatgctcgcgttgaacaccgcgctgcacggtgacgtcgacggg
gcgcgggcgctgctcgacaggctggaggccgccgcgcgtggcgactcctacgcgatcacg
gtctgggccgccttcgccgtcacggtagcggcgctggccggcgaccccgcctgggcacta
cgcgcagcggaacggggaatcgcggtggacccggaacattccttcgtcttcctcggcagc
taccagcgactggcccggtgctgggcgcgggccgtgaccggcgaagacccggccggcgcc
gcgacagaggccaaaatgatcatcgcggcgaccctgctcgatccgccacgctcgggcctg
gccacctggtacggactgctcgccgagatgtggctggcggccgggatgccggccgaggcc
accgccaccctcgaccgggccgactcgttcctcgacacctacggccagcgctaccccgaa
ggcctgatactcctgctgcgggcacggatgatgcaggcacgcggcgagcccaccgccgcc
gtccaggccgccgtcgagcgggctcgcgcgctgtccgtcgagcgcgaggctcacctgttc
gcccaccgcgccgaggaattgtcggccgggctggcgacggagccggccggccactga
DBGET
integrated database retrieval system
