Parafrankia sp. EAN1pec: Franean1_6993
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Entry
Franean1_6993 CDS
T00608
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
fre
Parafrankia sp. EAN1pec
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
DUF948
OmpH
ATG14
HEPN_Toprim_N
Motif
Other DBs
NCBI-ProteinID:
ABW16324
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Position
complement(8515355..8518834)
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AA seq
1159 aa
AA seq
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MSPNPSTLLRDIREDRDISHAASRAAWHSGRTTGLEDETVTEVTARNQTPAQLDDPALRQ
LLAGLTAVRGGDFGTRLPRVGDELMDEIATVFNGMIDQLALFTSEVTRVAREVGTEGKLG
GQAEVPGVSGSWKDLTDNVNAMAGNLTGQVRDIAQVATAVAEGDLSQKIRVDARGEILEL
KETINTMVDQLSGFADEVTRVAREVGTDGRLGGQADVKGVSGTWRDLTESVNVMAGNLTS
QVRSIAQVATAVARGDLSQKIRVDARGEILELKETINTMVDQLSGFADEVTRVAREVGTD
GRLGGQASVKGVSGTWKDLTDNVNFMANNLTSQVRNIAQVTTAVARGDLTRKIDVDARGE
ILELKTTINTMVDQLSSFAAEVTRVAREVGTDGILGGQAEVEGLSGTWKRLTENVNELAG
NLTRQVRAIAAVTSAVATGDLTRSITVDAQGEVAELKDNINAMVRSLRETTRANHEQDWL
KTSLAHIAGLMQGHRELETVAQLVIDELTPMLDAQHGTFFLADAGVDAPALTLIASYGYR
PTPDMPRRFEFGQSLVGQAARTKRSIVARTPADYLKIASSLGEATPVTLIVLPILFEDQV
LGVVELASFTPFTQVHLDLLNQLTETIGVNVNTIIANSRTDALLEESQRLAGELQARSEE
LQSRQEDLQLSNAELEEKATLLARQNHDIEVKNAEIEQARQELEERARQLALASKYKSEF
LANMSHELRTPLNSLLILARLLAQNPTRNLTAKQVEYAHVIHTAGSDLLQLINDILDLSK
VEAGKMDIHLERVVLRDLAEDLKSTFSPITVEKGLRFTVDLAPGIPADLLTDQHRLAQVL
RNLLSNAVKFTERGSVELAIVATLGGDLSPATPSVTFKVTDTGVGIAEENLERIFGAFQQ
GDGTTSRRYGGTGLGLSICREVAALLGGEIEARSEFGRGSTFSLRLPLAPPPPTEPEMVP
RPRRTQALSETEPSSGDPRPVGAPSALAAPAPPAVVPGPPSALPVDDRRPPRQAAYNNDQ
LTGCTVLVVDDDVRNVFAITSILELYGLNVIHAENGRRGIEMLQSDPSIDLVLMDVMMPE
MDGYTTMTAIRTMPRIADLPIIAVTAKAMPDDRQKCLDAGATDYITKPVDVDELLACIRT
RLVTGSGVGGRRAGGLGAG
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
gtgagccctaatccgtctactctactgcgggacatccgcgaggatcgggacatctctcat
gccgcttctcgcgccgcttggcacagcggccgcacgaccgggctggaggacgagacggtg
actgaggtaacggcgcgtaaccagaccccggcccagctggacgacccggcgctgcgtcag
ttgctcgccggtctcaccgccgtgcggggtggggatttcggaacccggctgccgcgcgtc
ggcgacgagctgatggacgagatcgccaccgtcttcaacgggatgatcgaccagctcgcg
ctgttcacctccgaggtgacgcgggtggcccgggaggtcggcaccgagggcaagctcggc
ggccaggccgaggtgccgggcgtctccggctcctggaaggacctgaccgacaacgtcaac
gcgatggcggggaacctgaccggccaggtccgtgacatcgcgcaggtcgcgacggcggtc
gcggagggcgacctctcccagaagatccgcgtcgacgcccggggcgagattttggagctg
aaggagaccatcaacacgatggtcgatcagctttcgggtttcgcggacgaggtgacgcgg
gtggctcgggaggtcggcaccgacggtcgtctcggtggtcaggcggacgtcaaaggtgtg
tcgggtacctggcgcgacctcaccgaatccgtcaacgtcatggccggcaacctgaccagc
caggtgcgttccatcgcgcaggtcgcgacggcggtcgcgcggggcgacctctcccagaag
atccgcgtcgacgcccggggcgagattttggagctgaaggagaccatcaacacgatggtc
gatcagctttcgggtttcgcggacgaggtgacgcgggtggctcgggaggtcggcaccgac
ggccgcctcggtggccaggcgagcgtcaagggcgtctccggcacctggaaggacctgacc
gacaacgtcaacttcatggcgaacaacctcaccagccaggtccgcaacatcgcccaggtc
accacggccgtcgcccgcggtgacctgaccaggaagatcgacgtcgacgcccgcggcgag
atcctcgaactgaaaacgaccatcaacacgatggtggaccagctgtcctcgttcgcggcc
gaggtgacccgggtggcgcgcgaggtcggcacggacggcatcctcggcggccaggcggag
gtcgagggactctccggcacctggaagcgcctgaccgagaacgtcaacgagctcgccggg
aacctcacccgccaggtccgggccatcgccgccgtcaccagcgcggtcgccaccggcgac
ctgaccaggtcgatcacggtcgacgcgcagggcgaggtcgccgagctcaaggacaacatc
aacgcgatggtccgctccctgcgcgagaccacccgcgccaaccacgaacaggactggctg
aagaccagcctcgcccacatcgccgggctcatgcagggccaccgcgagctggagaccgtc
gcgcagctggtcatcgacgagctgaccccgatgctcgacgcgcagcacggcaccttcttc
ctcgccgacgccggtgtggacgccccggcgctcaccctcatcgcgagctacgggtaccgg
cccacccccgacatgccgcgcaggttcgagttcggccagtcgctcgtcgggcaggcggcg
cggacgaaacggtccatcgtggcccgcacccccgccgactacctgaagatcgcctccagc
ctcggcgaggcgaccccggtgacgctgatcgtgctgccgatcctgttcgaggaccaggtg
ctcggcgtcgtcgagctcgcctccttcaccccgttcacccaggtccacctcgacctgctg
aaccagctgacggagacgatcggcgtcaacgtcaacacgatcatcgcgaactcgcggacg
gacgcgctgctcgaggagtcccagcggctcgcgggcgagctgcaggcccggtccgaggag
ctgcagtcccgccaggaagacctccagctctccaacgcggagctggaggagaaggccacc
ctgctggccaggcagaaccacgacatcgaggtcaagaacgccgagatcgaacaggcccgc
caggagctggaggaacgcgcccggcagctggcgctcgcctccaagtacaagtccgagttc
ctggcgaacatgtcgcacgagctgcgcacaccactgaacagcctgctgattctcgcccgc
ctgctggcgcagaacccgacccgcaacctcaccgccaagcaggtggagtacgcccacgtc
atccacaccgccggctcggatctacttcagctgatcaacgacattctcgacctctccaag
gtcgaggccgggaagatggacatccacctggaacgggtcgttctgcgtgatctcgccgag
gacctgaagagcaccttctcgccgatcaccgtggagaagggcctgcggttcaccgtggac
ctcgcccccggcataccggccgatctcctcaccgatcagcaccgcctcgcgcaggtgctg
cgcaacctgctctccaacgcggtgaagttcaccgagcgcggcagcgtcgaactcgccatc
gtcgccaccctgggcggggacctgtcaccggccacccccagcgtcaccttcaaggtcacc
gataccggcgtcggtatcgccgaggagaacctcgaacgcatcttcggggcgttccagcag
ggcgacggcaccaccagccgccgctacggcggcaccggcctcggcctgtccatctgccgt
gaggtcgccgccctcctcggcggcgagatcgaggcccgcagcgagttcggcaggggcagc
accttcagcctgcggctgccgctggctcccccgccgccgactgagcccgagatggttcct
cggccccgccgcacgcaggccctgagcgagaccgagccttcgtcaggcgacccgcgcccc
gtcggcgcgccgtccgccctcgccgcccctgcgccgcccgccgtcgtgcccggcccgccg
agcgccctgcccgtggacgaccggcgtccgccgcggcaggcggcctacaacaacgaccag
ctgaccgggtgcacggtgctggtggtggacgacgacgtgcgcaacgtcttcgccatcacc
agcatcctcgagctctacgggctgaacgtgatccacgccgagaacggtcgccggggcatc
gagatgctgcagtccgatccgagcatcgacctggtcctgatggacgtcatgatgcccgag
atggacggctacacgaccatgaccgcgatccgcaccatgccgcggatcgcggatctgccg
atcatcgccgtcaccgcgaaggccatgcccgacgaccggcagaagtgcctcgacgccggc
gcgaccgactacatcaccaagcccgtcgacgtcgacgagctcctcgcctgcatccgaacg
aggctggtcaccggttcgggcgtcggcgggcggcgggcaggagggctgggcgctgggtga
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