Parafrankia sp. EAN1pec: Franean1_7233
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Entry
Franean1_7233 CDS
T00608
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_7233
Enzymes [BR:
fre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Franean1_7233
DNA repair and recombination proteins [BR:
fre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Franean1_7233
Prokaryotic type
Franean1_7233
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ABW16552
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Position
complement(8831178..8832407)
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AA seq
409 aa
AA seq
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MWWLRRDLRLDDNPALLAAAESGRVLALFVLDDALRRPSGPVRLAFLHRCLRDLDAQLGG
RLCVRTGSPYAVAPGRLRKADGTSYRVFTPFYRAWKEHGWRGPAIPADPVWLQPADLDGG
SEPIPADPELGGTELPPAGEHAAHERLRAFLTESLAGYAAHRDEPAAASESGDAVPGWSG
ASRAGGAGGAGGAGGADAAGGGGGLAGSAEKFRSELAWREFYADVLAGTPSSARTDLTDT
LAALAYEPPGDTFEAWKWGRTGYPIVDAGMRQLLAEGWVHNRVRMIEASFVCKDLNVHRT
HGARWYLERLVDGDLASNNHGWQWTAGTGTDAAPYFRVFNPVSQGRKFDPAGEYIRRWVP
ELRGLPPDAVHEPWKLPAGPPNGYPRPVVDHAVERREALDRHARARHHD
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
gtgtggtggcttcgccgtgacctccgcctcgacgacaacccggcgctgctcgccgccgcc
gagtccggccgggtgctggctctcttcgtcctcgacgacgcgctgcggcgcccgtccggt
cccgtccgcctggcgttcctccaccggtgcctgcgcgacctggacgcccagctcggcggc
cggctgtgcgtgcgcaccggctcgccctacgcggtagcgcccggccgcctgcgcaaggcc
gacgggacgtcctaccgggtgttcacgcccttctaccgggcctggaaggaacacggctgg
cgcgggccggccatcccggcggatccggtctggctccagcccgccgacctcgacggcggc
agcgaaccgatcccggcggatccggagctcgggggcaccgagctacccccggccggcgaa
cacgccgcgcacgagcgcctgcgcgccttcctgaccgaatcgctggccggctacgcggcg
caccgcgacgagccggccgcggccagcgaatcgggagacgccgtacccggctggtccggg
gccagccgggctggcggggccggtggcgctggcggggctggcggggccgatgcggctggc
gggggcggcgggctggccggttcggccgagaagttccgctccgagctcgcctggcgggag
ttctacgcggacgtcctcgccggcaccccctcgtcggcccggaccgacctcaccgacacc
ctggccgcgttggcctacgagcctcccggtgacaccttcgaggcgtggaagtggggccgc
accggttacccgatcgtcgacgccggcatgcgccagctcctcgccgagggctgggtgcac
aaccgggtccggatgatcgaggcctcgttcgtctgcaaggacctgaacgtccaccggacg
cacggcgcccgctggtacctcgagcgcctcgtcgacggcgacctcgcgtccaacaaccac
ggctggcagtggacggccggcaccggaaccgacgccgccccgtacttccgggtcttcaac
cccgtctcgcaggggcgcaagttcgatcccgccggggagtacatccgccgatgggtcccc
gaactgcgcggcctcccgcccgacgcggtgcacgagccgtggaaactcccggccggcccg
ccgaacggctacccacgcccagtcgtcgatcacgctgtcgaacgccgggaggccctcgac
cgccacgcccgagcccgacaccacgactaa
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