Candidatus Francisella endociliophora: LO80_01780
Help
Entry
LO80_01780 CDS
T03403
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
frf
Candidatus Francisella endociliophora
Pathway
frf03420
Nucleotide excision repair
frf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LO80_01780
03430 Mismatch repair
LO80_01780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frf03400
]
LO80_01780
Enzymes [BR:
frf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LO80_01780
DNA repair and recombination proteins [BR:
frf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LO80_01780
MMR (mismatch excision repair)
Other MMR factors
LO80_01780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
AAA_30
AAA_11
HerA_C
His_Phos_2
Motif
Other DBs
NCBI-ProteinID:
AIT08830
UniProt:
A0A097EMP3
LinkDB
All DBs
Position
complement(383170..385230)
Genome browser
AA seq
686 aa
AA seq
DB search
MQYTSEQQSIINHPVNRHALVSAVAGSGKTQTLIARVEYLLSQGIPPNKILILMYNKSAQ
LDFATRLRKVIKPDLARSINVRTMHSLGNSFLQAFAKAGFVHIDKILKEYELDTIIQKLL
KNYQKELKITKDVDSERIELFKEYISLLKSDLSLGNKKIKKLNSKEKELLDKVFNDFNKE
CEKQKAITYDDMIYLPAKLFEKNNATASQASNLYSHIIIDEYQDINQVQQYFLKCLVGEN
TFVMAVGDVDQTIYQWRGSTPYYMLEGFKKDFKNVKQYTLSYTFRYGDLVSLMANNIITN
NKKRHDNLCITYPKLDKTTDISILDSSDKVVLKLKALIESGVSANDIAILVRRYNSTTVF
ELSCLYHDLAYSVVADKNIFSENLFKAIYGYLMLFNKGAGFEKHNIDQRAEFIKSMLDYP
SLYLKKDVKQKLAHDIAKDVSKAMSLISDLTKDVDKPFKEKNILAVAGSWRAIFNNSRIK
KSEKAIDFILETLNLEKQISKSSIETHSSKSKLQIIEGMSSFAKGKKSRLSEFIELLYEL
YIKSAQQNDNDPNQIQIMSMHRAKGLEWDYVVVHDATEGGFFGEKNSKVTDEVVEEERRL
FYVAVTRVKKHLFIVSSDDISRLSAWYQVNKNSYPKDLKCKNSVRFLYEGNLAECESYLD
KQESLNLEDIKSKLLKKYYKKVSCFV
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcaatatacatcagagcaacagagtattataaatcatcctgtgaataggcatgcttta
gtttctgccgttgcaggaagtggtaaaacacagacacttatagctagagtcgagtattta
ttatctcaaggtattccacctaataaaattctaattttgatgtataacaaatcagctcag
cttgattttgctactaggcttagaaaagtaattaagccagatcttgccagatctataaat
gttcgtacaatgcattcattaggtaatagctttttgcaggcttttgctaaagcaggattt
gttcatatagataagattctcaaagagtatgagctagatactattattcaaaagctgcta
aaaaattatcagaaagaattaaagataacaaaagatgttgatagtgaaagaatagagcta
tttaaagaatatatttcactattaaaatcagacctgtctttaggcaataaaaagatcaaa
aagttaaattcaaaagaaaaagaacttcttgataaagtttttaatgattttaataaagaa
tgtgaaaaacaaaaagcaataacctatgatgatatgatttatcttccagctaagcttttt
gaaaagaataatgcaactgcatcacaagctagtaatttatattcacatattattattgat
gagtatcaagatataaatcaagtacagcaatattttttgaaatgtctagttggtgaaaat
acttttgtaatggcagttggggatgttgatcaaacaatatatcagtggcgaggatcaaca
ccgtactatatgctagagggttttaaaaaagattttaaaaatgtaaaacaatatacgcta
tcgtatacttttcgttatggtgatcttgtatcgcttatggcaaataatattattacaaat
aacaaaaaacgccatgacaatttatgtataacttatcctaagctcgataaaactacagat
attagtattttagatagcagtgataaggttgttcttaagctaaaggctttgattgagagt
ggtgtaagtgcaaatgatattgctatcttagtaaggagatataactcaacaactgttttt
gagttgagctgtttatatcatgatctagcctatagtgttgttgcagataaaaatattttt
agtgaaaacctcttcaaagctatatatggctatttgatgttatttaacaaaggtgctggt
tttgaaaaacataatatagaccaaagagctgagtttataaaatcgatgttagactatcca
tctttatatttaaaaaaagatgttaagcaaaagctagctcatgacatagcaaaagatgta
tcaaaagctatgagtttgatttctgatctaacaaaagacgtcgataaaccatttaaagaa
aaaaatattttagctgttgctggtagttggagagctatatttaataactctagaattaag
aaatcagaaaaagctatagattttatattagaaactttaaatttagaaaaacagatatca
aaatcatctatagagactcattcaagtaaatctaagctgcagattattgaagggatgagc
agttttgcaaaaggaaagaaatcacggttatctgaatttatagagctattgtatgagcta
tatataaaatcagctcagcaaaatgataacgaccccaatcaaatacaaattatgtcaatg
catagggcaaagggtttggagtgggattatgtcgtggtacatgatgctacagagggcggt
ttctttggggagaaaaattcaaaggtaaccgatgaggtggtcgaggaagaacgtcgctta
ttttatgttgctgttactagagttaaaaaacatttgtttatagtatcttctgatgatata
tcaagattgtcagcatggtatcaggtaaacaaaaatagctatcctaaagatctaaagtgt
aaaaatagtgttagattcttatatgaaggtaatttagcagaatgtgaatcttatttagat
aaacaagaatctctaaatttagaggatattaaaagtaagcttttaaagaaatattataag
aaagttagttgttttgtttag
DBGET
integrated database retrieval system
