Candidatus Francisella endociliophora: LO80_02330
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Entry
LO80_02330 CDS
T03403
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
frf
Candidatus Francisella endociliophora
Pathway
frf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
frf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LO80_02330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frf03400
]
LO80_02330
DNA repair and recombination proteins [BR:
frf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LO80_02330
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LO80_02330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
Kinesin
AAA_30
SWI2_SNF2
eIF3_p135
Microtub_bd
AAA_22
DUF87
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AIT08930
UniProt:
A0A097EMZ2
LinkDB
All DBs
Position
complement(495095..497101)
Genome browser
AA seq
668 aa
AA seq
DB search
MDKFNLITKYSPSGDQPEAIKSLVEGVNNGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
IVAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGFKKAQTKLVEMQY
SRNDMDFSRGNFRVRGEILDIFPADSEADAIRVEFFDDEIEAISIIDSLTSKKIKSIHRA
TIFPSTHYVASKERKEQIIEDIKIELKERIKYFEEEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRNPGDPPPTLIDYLPEDALVIVDESHVTLPQFGGMYKGDLSRKSNL
VNYGFRLPSALDNRPLKFDEFEKLLPQTIYVSATPANYELDKSQNTVEQIIRPTGLLDPE
VEVRPVAIQVEDALSEINKAIAKEERILITTLTKKMAENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMKKAMDETLRRRKLQDEHNKKNGITPKTIIKNIDDMLDSSPE
MQKRAYKNNSRLKVDDVDVSAILGMTEASKVIKALEKRMRAYAKELEFEKATQIRDKITE
VKQKFINL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttaaccttataacaaaatatagtccaagcggagatcagcctgaggctatt
aaatcacttgtcgaaggtgtgaataatggcttacaacaccaggttttattaggagttaca
ggctctggtaaaacttatactatggcaaatgtgattcaacaaacacaaaaaccatgtttg
attgtcgcacataacaaaactttagcagcacaactatattcagagtttaaacaatatttt
ccagataatgcagttgagtattttgtgtcatattatgattattatcagccagaagcttat
gttgctgcatcagatacttatattgagaaagattcatcagtaaatgaacatattgaacaa
atgcgactatcagctacaaaagccatattagaaagaaatgatgtaataatagttgcgaca
gtttctgctatctatggtctaggtgatcctgaacaatatatgcaaatgcttttacattta
aaagtaggtgaggaattagggtttaaaaaagcgcaaactaaattggttgaaatgcagtac
tcccgaaatgatatggattttagtcgtggtaattttcgtgttcgaggtgaaatactagat
atatttccagctgattctgaagctgatgctattcgagttgagttttttgatgatgaaata
gaagctattagtattatagattcacttacttctaaaaaaataaaatctatccatagagcg
acaatttttccaagtactcactatgtagcttctaaagaacgaaaagagcagataatcgaa
gatatcaaaatagagctcaaggaaaggatcaaatattttgaagaagagggtaagcttctt
gaggctcagaggattgagcaacgcacaaaatatgatattgagatgattcaagagcttggt
tactgtacgggtattgagaattattcaagactactatcaggtcgtaaccctggcgatcca
ccaccaacacttattgattatctgccagaagatgctttggtaatagtagatgagtctcat
gtgacgctaccgcagtttggggggatgtataagggagatttgtcaagaaaatctaatctt
gtaaattatggttttagattaccgtcagcattggacaatcgacctctaaaatttgatgag
tttgaaaaacttctgccacaaaccatttatgtgtcggcaacaccagcaaattatgaatta
gataaatctcaaaatacagttgagcagattatccgtccaacaggtttattagatccagaa
gtagaagtacgtccagtagctatccaagttgaagatgctctttcagagataaacaaagcg
attgcaaaagaagaaagaatcttaattacaactttaacaaaaaaaatggcggaaaatctc
acagagtatttatcagagcatggtgtcaatgttagatatcttcattcagatattgatact
gttgagagggtacaaattattcatgatttgcgtcatggagtatttgatgtgcttgtaggt
attaaccttttaagagaaggtctagatatgccagaagttggggtgctacttatctttgat
gcagataaagaagggtttcttcgctctgaaaaatctcttatccaaacaattggtagggta
gcaagaaaccaaaatggccgagcaattttgtatgcagatgtagtaacaaagtctatgaaa
aaagctatggatgaaactcttcgtcgtcgtaaattacaagatgaacataataaaaaaaat
ggtattactccgaagacaattattaaaaatattgatgatatgcttgatagttctccagag
atgcaaaagagagcatataaaaataattcacgactaaaggttgatgatgttgatgtttca
gctatactaggtatgactgaagctagtaaagtaattaaagctctagagaagcgtatgcga
gcttatgcaaaagagttagagtttgaaaaagctacgcaaatcagagataagataaccgaa
gtcaagcagaagtttattaatttataa
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