Candidatus Francisella endociliophora: LO80_02335
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Entry
LO80_02335 CDS
T03403
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
frf
Candidatus Francisella endociliophora
Pathway
frf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LO80_02335
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frf03400
]
LO80_02335
Enzymes [BR:
frf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
LO80_02335
DNA repair and recombination proteins [BR:
frf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LO80_02335
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LO80_02335
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LO80_02335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Exonuc_X-T_C
zf-RING_UBOX
Motif
Other DBs
NCBI-ProteinID:
AIT08931
UniProt:
A0A097EMZ0
LinkDB
All DBs
Position
complement(497102..498550)
Genome browser
AA seq
482 aa
AA seq
DB search
MFQNQTFLFYDLETSGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPMATI
THHISIAQANTGVSEYQAIRKIHKIINTPGTISIGYNTLGFDDEFLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYHLFCNEALKWPKVANEEGQEKTSLKLENLNTENNLYSGGRAH
DAITDVIVTVELAKRLKSTNPKMWQFLLDKFNKQNDENTLAQLDVGLEIADVKYKQAIAV
SGIFGFKNNFMSAILDLGQHRHYKNQEIFLRLDSYLFSEFIEEFGGLEAEHWRLTVNKKW
GDIPLILPAKTRFVGRLPQDRLELIKANKEFIKNNPEIFANFVDFVLEYKYPEIKNIDTD
AAIYQSGFMTSADERGCDKFHSLQTHQKSQMLNQLPRDYYDRAVRILGRLDFSKLPEKAQ
IEFQEYLNRVVSLDVDELLVDHRGKTRKTLEDIYQEMQDVRMNRDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaaccagacttttttattttatgacttagaaactagtggtataaataattct
tttgatcaagttttacagtttgctgcaattcgtacagatttggattttaatgagattgaa
aggtttaatttttttgtgaaattaaatcctgataccacaccatcgccaatggcaactatt
acgcatcatatttctattgctcaggcaaatacaggtgtatcagaatatcaagctatccga
aaaattcataagataattaatacaccaggaactataagtattggatataatactcttggc
tttgatgatgagtttttgagatttgctttttataaaaatatgctacctccatatagccat
cagtttaaaaatggttgttcaagagctgatttatttccaatagttacctgttatcatcta
ttttgtaatgaggctctcaaatggccaaaagtagcaaatgaagaaggacaagaaaaaaca
tctctaaaattagaaaatctaaatactgaaaataacttatatagtggtggtagagctcat
gatgcaattacagatgtaattgtaacagttgagttagcaaaaagattgaaatctactaac
cctaaaatgtggcagtttttattagataagtttaataagcagaatgatgaaaatactcta
gctcagctagatgttggcttagaaattgcagatgtaaaatataaacaagctatagctgta
agtggtatttttggatttaaaaataattttatgtcagcaattttagatcttggtcaacat
aggcattataagaaccaagagatattcttacgcttagatagttatctttttagtgagttt
atagaagagtttggtggtttagaagcagagcattggcgcttgactgtaaataagaagtgg
ggtgatattccgcttattttacctgctaaaactcgttttgttggtaggttacctcaagat
aggttagagctgataaaggcaaataaagagtttataaaaaataatccagaaatttttgct
aactttgttgattttgttttggaatataaatatccagaaattaaaaatatagatacagat
gctgctatttatcaaagtggttttatgactagtgcagatgaacgaggttgtgataagttc
catagtttacaaacacatcaaaaatctcagatgctaaatcaattaccaagagattattat
gatagagcagttagaatactaggtagattagatttttcaaaactacctgaaaaagcacaa
atcgaatttcaagaatatttgaatagagtggttagcttagatgtagatgaactactagtc
gatcatagaggtaaaactcgtaagactcttgaagatatttatcaagaaatgcaagatgta
cgcatgaatagagatttaacggaagagcaacaagctttgttgtatgagttagaggagtat
ctgttttag
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