Candidatus Francisella endociliophora: LO80_04000
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Entry
LO80_04000 CDS
T03403
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
frf
Candidatus Francisella endociliophora
Pathway
frf03030
DNA replication
frf03430
Mismatch repair
frf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LO80_04000
03430 Mismatch repair
LO80_04000
03440 Homologous recombination
LO80_04000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frf03032
]
LO80_04000
03400 DNA repair and recombination proteins [BR:
frf03400
]
LO80_04000
Enzymes [BR:
frf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LO80_04000
DNA replication proteins [BR:
frf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LO80_04000
DNA repair and recombination proteins [BR:
frf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LO80_04000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AIT09217
UniProt:
A0A097ENS4
LinkDB
All DBs
Position
complement(807202..810681)
Genome browser
AA seq
1159 aa
AA seq
DB search
MISHLRVHTGFSVVDSTVRLGDLFARAKDKDIVAVALTDVSNLFAAVKFYKQALGSGVKP
IFGVELKVVTGFGVSDLVLLAETNTGYQNIVNLVSKAYQEGQRHGSIPLVEKSWLKEADL
IEIICLNGGQYGELGQAILAKDIAKAEQVIAENIAIFGADNYIVEIHKLGYENEGLYNEK
ALELASKHNLIAVATNLTVFMESDDYDIHEIRACINEKTTILDESRKSKFTREQYLKSSD
EMYETFSALPILVDNSLAIAKRCNVTFDLGKPCLPTVDIPDGLTEKEYFSKLCYEGLENR
LEKVLANKPQDKHEHITKVYKDRLQREIDIICDMGFPGYFLIVEDFIRWSKENDIPVGPG
RGSGAGSLVAYSLLITDIDPLPYGLLFERFLNPERVSMPDFDIDFCIQGRDRVIKYVEQK
YGKQSVGQIITYGTMAAKGVVRDVVRVMGQSFGFGDRIAKLIPETPGTTFKKILHEGEPL
YDEMQADEDVAEIVEKAQKLEGLPRSLGKHAAGIVISPTVISDFAPIYCEDKGGDIVTQF
DKGDVEDVGLVKFDFLGLKNLTIIKNAITSINAKRSNQETPLDISNIPLEDEKTFKLLQA
GNTTGIFQLESQGMRQIVKDLGTSNFEEIIALVALYRPGPMENIPTFIDRKHGRKRTTYL
HPLLEEVLKETYGIPVYQEQVMQMAQKLAGYTLGAADLLRRAMGKKKPEEMEQQRKIFKE
GAAKYHNIEAGLADEIFDQMEAFAGYGFNKSHAAAYALIAYQTAWLKAHYPDEYMAALMS
GDMGNTDQLVKFILDCKNMGITVLSPNVNKSVYDCIAISKGTILLGLGAIKGLGGEAIKS
ILTEREAEGEFSSIFDLTRRVDLRKVNKKALEALCFAGAIKEISRNRATAFNCIEKAIKN
AGYVNDMAAAGQNDLFGFTEQESDTDGELERECIIDEWSLKELLINEKKALGMYFSGHII
DEESHWRNHVSFSDLEKIQKPNMDGNSVRIIASMITPAMRRKTKTGRILYIINIDDEFDR
ADCLVGEDVFALVKDNIQVDDVVVVEGKVSRDIQRECNKLSVDKVLPISQYIDENFSKVE
LALRSQNVNPTNLKKVLDNLKTNIATTNIQRENTLEIKVLLDDVDGRFDYLNKPFSIYEF
VNDVSRLIAEGSTVSLSGK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgatttctcatcttagagtccatacagggttttctgttgttgatagtactgtgcgttta
ggtgatttatttgctcgagctaaagataaagatattgtagctgtagcacttactgatgta
agtaatttgtttgctgcagttaagttttataaacaagctctgggcagtggagtcaagccg
atatttggagttgagttgaaggtggttacggggtttggtgtatctgatttggtgcttttg
gctgagacaaatactggttatcaaaatattgtcaatctagtatctaaagcttaccaagaa
gggcaaaggcatggttctattccattagttgaaaaatcttggctaaaagaagcagattta
atagaaattatttgtttaaatggtgggcagtatggggagttgggtcaggctatactagct
aaagatattgcaaaagctgaacaagttatagctgagaatattgcaatatttggagctgat
aattatatagtagagatccataaactaggctatgaaaatgaaggtttatataatgaaaaa
gctcttgaactagctagtaaacataatctgattgctgtagctacaaatttgactgtattt
atggagtctgatgattatgatatccatgaaattagagcttgtatcaatgagaaaactaca
attcttgatgagtcacgtaagtctaaatttactagagaacaatacttaaagtcatctgac
gaaatgtatgagactttttcggcattgccaatacttgttgataactctttagcaattgca
aaacgttgtaatgtaacatttgatttgggtaagccttgtttaccgacagtagatattcca
gatggtttaactgagaaagagtatttctcaaaactatgttatgaggggctagagaatcgc
ttagaaaaagtactagcaaataagccgcaagacaaacacgaacatattacaaaagtttat
aaagatagattacaaagagagattgatattatctgtgatatgggattccctggctatttc
ctgatagtagaggattttataagatggtcaaaagaaaatgatattccagtaggtccaggg
cgtggttctggtgctggttcattagtggcatactcgttacttattacagatattgatcca
ctaccgtatggactactttttgagagattccttaatcctgaaagggtatcaatgccagat
tttgatattgatttctgtattcaaggtcgagatagggttatcaaatatgtagagcaaaaa
tatggtaaacaaagtgttggtcagattataacttacggtactatggctgctaaaggtgta
gtgcgagatgtagtgcgtgtaatgggtcaaagttttggttttggtgataggattgctaag
cttattcctgaaactccaggtacaacattcaaaaaaatcttgcatgaaggtgaaccgcta
tatgatgaaatgcaggcagatgaagatgttgctgaaattgttgagaaagcacaaaagtta
gagggtctaccacgaagcttaggtaagcatgctgcaggtatcgtgatatcaccaactgta
atatcagattttgctccgatatattgtgaggataagggcggtgatattgtaactcagttt
gataaaggtgatgttgaagatgttggtcttgttaagtttgactttttgggactaaaaaac
ttaacaattatcaaaaatgctattacaagtattaatgctaaacgatctaaccaagaaact
ccgttagatatctcaaatattcctcttgaagatgagaaaacgtttaagctgttacaagcg
ggtaatactacagggatatttcagctggagtcgcaaggtatgcgtcagattgtcaaagat
cttggtacttcaaattttgaggagattattgccttagtagcattatacagaccaggacca
atggaaaatataccaacatttattgatcgtaagcatggtagaaagagaactacatatctg
catccattattagaagaagttttaaaagaaacttatggtattccagtttatcaagagcag
gtaatgcagatggcgcaaaagcttgctggctatactcttggagccgcagatttattacgt
cgtgcaatgggtaagaaaaaaccagaagaaatggagcaacagcgtaaaatatttaaagag
ggtgctgctaaatatcataatattgaagctggtcttgctgatgaaatatttgatcagatg
gaagcctttgcaggttatggttttaacaaatcccatgctgctgcgtatgcgttgattgcc
tatcaaactgcttggctaaaggctcattatcctgatgagtatatggctgctcttatgtca
ggagatatgggtaatactgatcagttagttaagtttatcctagattgtaaaaatatgggt
atcacagttttatcaccaaatgtgaataagagtgtttatgactgtatagctatctcaaaa
ggtacaattttacttggtttaggggctatcaaaggacttggtggcgaggctattaagagt
atccttacagaaagagaagcagagggagagtttagctcaatctttgatttaactcgtagg
gtagatctacgtaaggttaataaaaaagctcttgaagcactttgttttgcaggtgctatc
aaagaaatttctagaaatagagcaacagcatttaactgtattgagaaagctatcaaaaat
gctggctatgtaaatgacatggcagctgctgggcaaaatgatttatttggttttacagag
caagagagcgatactgatggtgaattagaaagagagtgtattattgatgagtggagccta
aaagagttacttatcaatgagaaaaaagctcttgggatgtatttttctgggcatattatt
gatgaggaaagccattggcgtaatcatgttagctttagtgatcttgagaaaatacaaaaa
ccaaatatggatggtaattctgtaagaattattgctagtatgataactccagcgatgcgt
agaaaaaccaagacaggtagaatcttatatattatcaatatagatgatgagtttgataga
gcagactgtcttgttggtgaagatgtttttgcactagtcaaagataatattcaagttgat
gatgttgttgttgttgaaggcaaagtaagccgtgatatacagcgagaatgtaataaacta
agtgtagataaggtcctgccaatatctcaatatattgatgagaactttagtaaagtagag
cttgctctaagaagtcaaaatgtaaatcctacaaatcttaaaaaggttttagataattta
aaaacaaatattgctactactaatattcaaagagaaaatactttagaaataaaagtatta
ctggatgatgtcgatggtaggtttgattatctaaataagccattttcgatatatgagttt
gttaatgatgttagtaggttaatagctgagggcagtacggttagtttaagtggtaagtaa
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