Pseudofrankia inefficax: FraEuI1c_0006
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Entry
FraEuI1c_0006 CDS
T01354
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fri03032
]
FraEuI1c_0006
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_0006
Enzymes [BR:
fri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
FraEuI1c_0006
DNA replication proteins [BR:
fri03032
]
Prokaryotic type
DNA Topoisomerases
FraEuI1c_0006
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FraEuI1c_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
DAO_C
Motif
Other DBs
NCBI-ProteinID:
ADP78094
UniProt:
E3J256
LinkDB
All DBs
Position
8100..10592
Genome browser
AA seq
830 aa
AA seq
DB search
MVDVLPPPGDRIEPIGIEVEMQRSYLDYAMSVIVGRALPEVRDGLKPVHRRVLYAMYDGG
YRPDRGYFKCSRIVGDVMGNYHPHGDTSIYDTVVRLAQPWSLRYPLVDGNGNFGSPGNDP
PAAMRYTEARMAALAMEMLRDIDSDTVDFAPNYDGRSQEPLVLPSRFPNLLVNGAGGIAV
GMATNIPPHNLREVAAGVQWALNNPDATDEELLEALLGIIKGPDFPTHGMIVGRQGIEDA
YRTGRGSIRMRAVVNVEENKGRTQLVVTELPYQVNPDNLAEKIAELVRDNRISGISDVRD
ETSARIGQRLVIDLKRDAVAKVVLNNLYKHTQLQDTFGANMLAIVDGVPRTLRLDQMIRY
YVEHQVDVIVRRTRYQLRKAQERLHVLEGLLIALDHLDDVIALIRNAESADAARGQLMTR
YSLSEIQATAILDMQLRRLAALERQRIIDEAAELRAKVTELEAILASPQRQREIIGEELK
EVVDKFGDERRTRIVPFEGEMSIEDLIAQEDVVVTVTRGGYAKRTKTDLYRSQKRGGKGV
QGAALREDDIVEHFFVTTTHHYLLFFTNKGRVYRAKAHELPEQARSAKGQHVANILAFGQ
DERIAEVMAIRDYAAAPYLVLATKRGLCKKSALTDFDSNRAGGLVAINLREDDEVIGARL
VGADDDLLLVSRNAQSIRFHADDEQLRPMGRATAGVIGMRFDADDELLSIEVIKPDSTAS
LLVATSGGFAKRTHLNEYPLQGRGGKGVLTARIVPSRGNLVGALVVEPDDQLYAIASNGG
VLRTVARDVRQAQRQTMGVKLIDLETGVQVVGVARNADADDGDGDEPTAG
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgacgtactaccgccgcctggcgaccggattgagccgatcggcatcgaagtcgag
atgcagcggtcgtacctcgactacgcgatgtcggtcatcgtggggcgggccctgccagag
gtccgggacgggctcaagcccgtgcaccgccgggttctctacgccatgtacgacggcgga
taccggcctgaccgcgggtacttcaagtgctcccgcatcgtcggtgacgtcatgggtaac
taccacccccacggcgacacctcgatctacgacaccgtggtgcggctggcgcagccctgg
tcgctgcgctacccgctggtcgacgggaacggcaacttcggctcgccgggtaacgacccg
cccgcggccatgcggtacaccgaggcccggatggccgcgctggcgatggagatgctgcgc
gacatcgactcggacaccgtcgacttcgcgcccaactacgacggccgctcccaggagccg
ctcgtcctgccgagccggttcccgaacctgctcgtcaacggcgcgggcggcatcgcggtc
ggcatggcgaccaacatcccgccgcacaacctgcgcgaggtcgccgcgggcgtccagtgg
gccctgaacaacccggacgccaccgacgaggagctgctcgaggcgctgctcggcatcatc
aagggcccggacttcccgacccacggcatgatcgtcggccggcagggcatcgaggacgcc
taccggaccggccgcggcagcatccggatgcgcgccgtcgtcaacgtcgaggagaacaag
ggccgcacccagctcgtcgtcacggagctgccctaccaggtcaacccggacaacctcgcc
gagaagatcgccgagctggtccgggacaacaggatctccgggatctcggacgtccgggac
gagacgtcggcccggatcggccagcgtctggtcatcgacctcaagcgcgacgccgtcgcc
aaggtcgtgctgaacaacctgtacaagcacacccagctccaggacacgttcggcgcgaac
atgctggcgatcgtcgacggggtgccgcgcacgctgcgcctcgaccagatgatccgctac
tacgtcgagcaccaggtcgacgtgatcgtccggcggacccgctaccagctgcgcaaggcc
caggagcgcctgcacgtcctcgagggcctgctgatcgcgctcgaccacctggacgacgtg
atcgcgctgatccgcaacgccgagtcggcggacgcggcccgcggccagctgatgacgcgc
tactcgctctccgagatccaggcgaccgcgatcctggacatgcagctgcgccgcctcgcc
gccctggagcgccagcggatcatcgacgaggccgccgagctgcgggccaaggtcaccgag
ctggaggcgatcctcgcctcgccgcagcgccagcgcgagatcatcggcgaggagctcaag
gaggtcgtcgacaagttcggcgacgagcgccggaccaggatcgtcccgttcgagggcgag
atgtccatcgaggacctcatcgcccaggaagacgtcgtcgtcaccgtcactcgcggcggc
tacgccaagcgcaccaagaccgacctgtaccgctcgcagaagcgcggcggcaagggcgtg
cagggcgcggccctgcgcgaggacgacatcgtcgagcacttcttcgtcacgacgacccac
cactacctgctgttcttcacgaacaagggccgggtctaccgggcgaaggcgcatgagctg
cccgagcaggcccgcagcgccaagggtcagcatgtggcgaacatcctggcgttcggccag
gacgagcggatcgccgaggtgatggcgatccgcgactacgcggccgcgccctacctggtg
ctcgcgaccaagcgcggactgtgcaagaagtcggctctgacggacttcgactcgaaccgc
gccggcgggctcgtcgcgatcaacctgcgggaggacgacgaggtcatcggcgcgcggctc
gtcggcgccgacgacgacctgctgctcgtcagccgcaacgcccagtcgatccggttccac
gccgacgacgagcagctgcggccgatgggccgggccaccgcaggtgtgatcggcatgcgg
ttcgacgccgacgacgagctgctctcgatcgaggtcatcaagccggactcgacggcctcc
ctgctggtcgccaccagtggcggcttcgccaagcggacacacctgaacgagtacccgctg
cagggccggggcggcaagggcgtgctgaccgcgaggatcgtgcccagccggggcaacctc
gtcggcgcgctcgtcgtcgagcctgacgaccagctgtacgccatcgcgtccaacggcggc
gtcttgcgtaccgtagccagggacgtccggcaggcccagcgccagacgatgggcgtcaag
ctgatcgacctggagaccggtgtgcaggtcgtgggcgtcgcgcgtaatgctgatgccgac
gacggcgatggcgacgagccgacggccggctga
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