Pseudofrankia inefficax: FraEuI1c_0033
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Entry
FraEuI1c_0033 CDS
T01354
Name
(GenBank) extracellular solute-binding protein family 1
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
FraEuI1c_0033
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fri02000
]
FraEuI1c_0033
Transporters [BR:
fri02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
FraEuI1c_0033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
SBP_bac_11
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ADP78121
UniProt:
E3J283
LinkDB
All DBs
Position
39683..40927
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AA seq
414 aa
AA seq
DB search
MTTHDSTDRPGAQSPPPAVDPALLRGLTQPRLGRRQFLQAGGAAGLAAFLAACGVKGEKK
APATADDVATFWSDKKKAGTLDFANWPLYMDTDDAGKHPSLVQFEKDTGIHVNYRESIQD
NGEYFAKVQPQLAAHQSISADLIVITNGVYLDKFIELGFLAPLDQTKLPTFAKNADPSVK
NPSYDKGNKYTVAWQSGLVGIGYDPEKTGREITSYEDLFDPAFKGHVGMFGDNEDLPNFC
MVGMGIKPETSTEADWKNAAAKLTKQRDDGIVRKYYDQGYIDALASGDLWLSMAWSGDVY
QQQAGGKNLKFVVPKEGGLFWTDNMCIPITAAHPVDAITYMDYVYKPDVAAMLTDYINYI
TPVPGAKSLVDPALSGSPLIFPTADDLKKTYRYRDLTAAEEKTWNSIFQPIVQS
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgcacgacagcacggaccgtcccggcgcccagtcgccgcctcccgccgtcgac
ccggcgctcctgcgcggcctcacccagccccgcctcggccgccggcagttcctgcaggca
ggcggcgccgccggcctcgcggcgttcctcgccgcctgcggcgtcaagggggagaagaag
gcgccggcgaccgccgacgacgtcgccacgttctggagcgacaagaagaaggctggcacg
ctcgacttcgccaactggccgctctacatggacacggacgacgccggaaagcacccgtcg
ctggtccagttcgaaaaggacaccggtatccacgtcaactaccgggagtcgatccaggac
aacggcgagtacttcgcgaaggtgcagccgcagctcgcggcgcaccagtcgatcagcgct
gacctgatcgtcatcaccaacggcgtctacctggacaagttcatcgagctgggcttcctc
gccccgctggaccagacgaagctgcctaccttcgccaagaacgccgacccgtcggtgaag
aacccttcctacgacaagggaaacaagtacaccgtcgcgtggcagtccggcctggtgggg
atcgggtacgaccccgagaagaccgggcgcgagatcacgagctacgaggacctgttcgac
cccgccttcaagggccacgtcggcatgttcggcgacaacgaggacctgccgaacttctgc
atggtcggcatgggcatcaagccggagacatcgaccgaggctgactggaagaacgccgcc
gcgaagctgacgaagcagcgcgacgacggcatcgtccgcaagtactacgaccagggctac
atcgacgcgctcgcctccggcgacctgtggctgtcgatggcctggtccggcgacgtctac
cagcagcaggccggcggcaagaacctcaagttcgtcgtcccgaaggagggtggcctcttc
tggaccgacaacatgtgcatcccgatcaccgccgcccacccggtcgacgcgatcacctac
atggactacgtgtacaagccggacgtcgcggcgatgctgaccgactacatcaactacatc
accccggttccgggcgcgaagtcgctggtcgacccggcgctttccggatcgccgctgatc
ttcccgaccgcggacgacctgaagaagacctaccggtaccgggacctcaccgcggccgag
gagaagacctggaacagcatcttccagcccatcgtccagtcgtga
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