Pseudofrankia inefficax: FraEuI1c_0136
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Entry
FraEuI1c_0136 CDS
T01354
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FraEuI1c_0136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fri03019
]
FraEuI1c_0136
03110 Chaperones and folding catalysts [BR:
fri03110
]
FraEuI1c_0136
03029 Mitochondrial biogenesis [BR:
fri03029
]
FraEuI1c_0136
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fri04147
]
FraEuI1c_0136
Enzymes [BR:
fri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FraEuI1c_0136
Messenger RNA biogenesis [BR:
fri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FraEuI1c_0136
Chaperones and folding catalysts [BR:
fri03110
]
Heat shock proteins
HSP60 / Chaperonin
FraEuI1c_0136
Mitochondrial biogenesis [BR:
fri03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FraEuI1c_0136
Exosome [BR:
fri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FraEuI1c_0136
Exosomal proteins of other body fluids (saliva and urine)
FraEuI1c_0136
Exosomal proteins of breast cancer cells
FraEuI1c_0136
Exosomal proteins of colorectal cancer cells
FraEuI1c_0136
Exosomal proteins of bladder cancer cells
FraEuI1c_0136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ADP78224
UniProt:
E3J4Q5
LinkDB
All DBs
Position
complement(174270..175889)
Genome browser
AA seq
539 aa
AA seq
DB search
MPKIIAFDEEARRGLERGMNQLADAVKVTLGPKGRNVVLEKKWGVPTITNDGVSIAKEIE
LEDPYEKIGAELVKEVAKKTNDVAGDGTTTATILAQALVREGLRNVAAGANPLGLKKGIE
LAVESVSEELSKQAKEIETKEQIASTASISAGDPAIGALIAEALDKVGKEGVVTVEESNT
FGLELELTEGMRFDKGYISPYFVTDADRQEAVLDDPYILIVNSKISAVKDLLPLLEKVMQ
ASKPLVIISEDVEGEALATLVVNKIRGTFKSVAVKAPGFGDRRKAMLGDIAILTGGQVIS
EDVGLKLESTSIDLLGKARKVVVTKDETTIVEGAGDADQITGRVSQIRNEIDKSDSDYDR
EKLQERLAKLAGGVAVVKVGAATEVELKEKKHRIEDAVSNAKAAVEEGIVAGGGVALLQA
SVSAFDKLDLTGDEATGANIVRLALEAPIKQIAFNSGLEGGVVVDKVRNLPIGHGLNAAT
GEYVDMLATGIIDPAKVTRSALQNAASIAGLFLTTEAVIADKPEKNPAPAMPGGGDMDF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagatcattgccttcgatgaggaggcgcggcgcggcctggagcgcggcatgaac
cagctggccgacgccgtcaaggtcacgcttggtccgaagggccgcaacgtcgttctggag
aagaagtggggcgtacccacgatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggacccgtacgagaagatcggtgccgagctcgtcaaggaagtcgccaagaagacc
aacgacgtcgcgggtgacggcaccaccaccgcgacgatcctggcccaggcgctggtccgc
gaggggctgcgcaacgtggccgccggcgcgaacccgctcggcctgaagaagggcatcgag
ctcgcggtcgagagcgtctccgaggagctctcgaagcaggccaaggagatcgagaccaag
gagcagatcgcctccacggcgtcgatctccgcgggcgacccggccatcggcgcgctgatc
gccgaggcgctcgacaaggtcggcaaggaaggcgtcgtcaccgtcgaggagagcaacacc
ttcggcctggagcttgagctcaccgagggcatgcgcttcgacaagggctacatctcgccg
tacttcgtcacggacgccgaccgtcaggaggccgtcctcgacgacccgtacatcctgatc
gtcaactccaagatctcggccgtcaaggacctgctcccgctgctggagaaggtcatgcag
gccagcaagccgctggtcatcatctccgaggacgtcgagggcgaggccctcgccaccctg
gtcgtcaacaagatccgtggcaccttcaagtccgtcgccgtcaaggccccgggcttcggt
gaccgtcgcaaggccatgctcggcgacatcgcgatcctgaccggtggccaggtcatctcc
gaggacgtcggcctcaagctggagtcgacctcgatcgacctgctgggcaaggctcgcaag
gtcgtcgtcaccaaggacgagacgacgatcgtcgagggcgccggcgacgcggaccagatc
accggccgtgtctcgcagatccgcaacgagatcgacaagtccgactcggactacgaccgc
gagaagctccaggagcgcctcgccaagctcgccggcggcgtcgccgtcgtcaaggtgggc
gcggcgaccgaggtcgagctcaaggagaagaagcaccgcatcgaggacgccgtctccaac
gcgaaggcggccgtcgaagagggcatcgtcgccggcggtggcgtggccctgcttcaggcc
tcggtcagcgcgttcgacaagctcgacctgaccggcgacgaggccaccggggcgaacatc
gtccggctcgcgctcgaggcgccgatcaagcagatcgcgttcaacagcggtctcgagggc
ggcgtcgtggtcgacaaggtgcgcaacctgccgatcggccacggcctgaacgcggccacg
ggcgagtacgtcgacatgctggccaccggcatcatcgacccggcgaaggtcacccgctcg
gcgctgcagaacgccgcgtcgatcgccggcctcttcctcaccaccgaggccgtcatcgcc
gacaagcccgagaagaacccggccccggccatgccgggcggcggggacatggacttctag
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