Pseudofrankia inefficax: FraEuI1c_0486
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Entry
FraEuI1c_0486 CDS
T01354
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_0486
Enzymes [BR:
fri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
FraEuI1c_0486
DNA repair and recombination proteins [BR:
fri03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
FraEuI1c_0486
Prokaryotic type
FraEuI1c_0486
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADP78569
UniProt:
E3JA07
LinkDB
All DBs
Position
complement(591291..592634)
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AA seq
447 aa
AA seq
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MTTLAVFTRDLRVHDNPMLTAAALAGEHTVPLFVLDAAMARSGFATGARERFLAESLADL
DRSLRELGGRLVVRAGDPVEQVCRVADEVDAGTVHLAADCSGYAQRREAALRSALAERGR
TLHCHDEAHVVVAPGRVTPAGRDHYAVFGAYHRRWEAAGWRRVIAPPARLRLPAVDPGAL
PPIGGPAGGESAGGGFHGGETVGRRRAEEWLREGVEVYDERRDQLAADATSRLSPYLHLG
CLSALELATQAGTGDAARDFVRQLAWRDFFHQLLAARPAAAHEDYRDAHRTWRDDPAALD
AWRSGHTGIPIVDAGMRQLLTEGWLPNRARMITASFLTKTLGLDWRAGAAHYTEHLLDAD
VANNSLNWQWVAGTGTDTRPGRVLNPLRQAERFDPDGVYVRRHVPELAGLPGRQVHRPWR
LPDRERAALDYPEPLPILPERLTSEQF
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgctcgccgtcttcacccgcgacctgcgcgtgcacgacaacccgatgctcacc
gcggccgccctggcgggtgagcacacggtgccgctgttcgtgctggacgcggcgatggca
cggtccggcttcgcgaccggcgcccgcgagcggttcctcgccgagagcctcgccgacctc
gaccgctcgctgcgggagctgggcgggcggttggtggtccgggcgggcgacccggtcgag
caggtgtgccgggtggccgacgaggtcgacgccggcacggtgcacctggccgcggactgc
tcggggtacgcgcagcggcgggaggcggcgctgcgctcggcgctggcggagcgcggccgg
acgctgcactgccacgacgaggcgcacgtcgtggtcgcgccgggccgggtgaccccggcc
ggccgggaccactacgccgtcttcggcgcctaccaccgacggtgggaggcggccgggtgg
cgacgcgtcatcgcaccgccggcccgtctccggctgccggcggtcgacccgggcgcgctg
ccgcccatcggcgggccggcgggcggcgagtccgcgggtggcggcttccacggcggcgag
acggtgggccggcggcgagcggaggaatggctgcgcgagggcgtcgaggtctacgacgag
cgccgagaccagctcgcggcggacgccacgtcccgactgtcgccctatctgcacctgggc
tgcctgtcggccctggagctggcgacccaggccggaacaggcgacgccgcccgcgacttc
gtccgccagctcgcctggcgcgacttcttccaccagctcctcgccgcccggccggccgcc
gcgcacgaggactaccgcgacgcgcaccggacctggcgcgacgacccggcggcgctggac
gcctggcgctccggtcacaccggcatccccatcgtcgacgccggcatgcgccagctgctg
accgagggctggctgccgaaccgggccaggatgatcaccgcgagcttcctgacgaagacc
ctcggcctcgactggcgcgccggcgcggcccactacaccgagcacctgctcgacgcggac
gtggcgaacaacagcctcaactggcagtgggtcgcgggtaccggcaccgacacccggcca
gggcgcgtcctgaacccgctgcgccaggccgagcggttcgaccccgacggcgtctacgtc
cgccggcacgtgccggagctggctggcctgccggggcgccaggtccaccggccgtggcgg
ctgcccgaccgcgagcgggccgcgctcgactacccggagcccctgccgatcctgccggaa
cggctgacctcggagcagttctga
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