Pseudofrankia inefficax: FraEuI1c_0527
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Entry
FraEuI1c_0527 CDS
T01354
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
fri
Pseudofrankia inefficax
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
ATG14
WXG100_2
RNase_Y_N
Motif
Other DBs
NCBI-ProteinID:
ADP78609
UniProt:
E3JB79
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All DBs
Position
660679..664956
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AA seq
1425 aa
AA seq
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MSLDRDHETPDARQDDGALPGSSTSPKAGSAVAGHPGTTDGAQPDTMTTTNGPAPNGGPG
SNGEQVAEVPAAGNGVATGLLDPPGDGLGSGGGPVSVDMLLSDLLAGLSGLCDGDFTVRL
GHRDGLGGEVARRFDELAATQERHSRELERVSNVIRRDGRLTQRMDDLGGRDGWRSITRS
VNSLIDDLARPTHEVGRVIAAVAEGDLSQHMPLEIAGQPVRGEFLRIGTTVNTMVDQLSS
FADEVTRVAREVGTDGALGGQANVKGVSGVWRDLTESVNSMAGNLTTQVRNIALVTTAVA
QGDLSQKITVDAQGEIAELKSTVNTMVDQLSAFADEVTRVAKEVGTEGRLGGQAQVKGVS
GVWRDLTDSVNVMAGNLTTQVRGIAEMAAAVQRGDLTRQITVDARGEVAALAHTLNTMVD
QLSSFADEVTRVAWEVGTEGNLGGQAHVRGVSGVWRDLTESVNSMAGNLTAQVRNIALVA
KAVAGGDLSQKITVTAQGEIAELKETLNTMVDQLSSFADEVTRVAREVGTEGNLGEQAHV
RGVSGVWRDLTESVNSMAGNLTAQVRNIALVTTAVANGDLSQKITVNAEGEIARLKDTVN
TMVDQLSSFADEVTRVAREVGTEGKLGGQATVTGVAGTWRDLTDNVNQLASTLTTQLRAI
GDVSTAVTRGDLTRSISVEAEGEVAELKDNINQMITRLRETTDLNAQQDWLKSNLARIGS
KMQGQRDLYAVCQMIISEMTPAVNAQQGTVYLLDFIEGDKLRYVAGYGSVPRRRSDGTFL
FGEGLIGQAAVEKTRIRVEKVPPGYLTIRSGLGSAPPSDLVVVPVLFENQVLGVIELASF
TPFSDLHLTLVDQLVDTIGVVLNTIMANARTEELLAQSQRLTQELRSQSVELQRTNAELE
EKAQLLEEKNTEIEQARTGLEEKAEQLALSSQYKTEFLANMSHELRTPLNSLLILAKLLA
DNQDDNLTYQQIEFARTIHSSGSELLMLINDILDLSKVEAGKMDVEATAVGTAAMCDALA
QAVRPVAEVKGLTFEVQVADDVPAEFVTDEQRIQQVLRNLLSNAVKFTDSGTVRLDVTVA
SSDGPFIVPSLRSAPTVLSFAVSDTGIGIATDKLRMIFEAFQQADGTTSRRYGGTGLGLS
ISKEIARLLGGSIAVSSVLGQGSTFTLYVPSVMPADQPFYGPIPGEPDDVLIIIGGDGAL
STAGVPYGSPLQALGSGTGGDPWIADPAQAAPFTGSAPVAAPAGTPELGAPWHPTGDLVG
AGASRPKLESSIPEPVGTPFLTETSRPRRELGPDEVDPLQGATVLVVDDDVRNVFALTSA
LEMFGMRVQYADNGHDAIRLVQQASVAIRLVLMDVMLPGMDGNETTSTIRAMPAFADLPI
LVLTAKAMPGDREKSISAGASDYITKPVDLDHLLSVMRSHMSDRP
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcgaccgtgaccacgaaacgccggatgcgcgccaagatgatggtgccttgccc
ggttcgtcgaccagcccgaaggccggctcggcagtggccggacacccggggactacggac
ggcgcgcagccggacaccatgacgaccaccaatgggccggccccgaacggcggcccgggc
tcgaacggggagcaggtggcggaggtccccgcggccggcaacggtgtcgcgacgggcctg
ctcgacccgcccggggacggcctgggatcgggcggcggccccgtctccgtcgacatgctg
ctgtccgacctgctcgccgggctctcgggcctgtgcgacggcgacttcaccgtccggctc
gggcaccgcgacgggctcggcggcgaggtcgcccgccggttcgacgagctcgcggcgacg
caggagcggcactcccgcgagctggagcgggtcagcaacgtgatccgccgagacggccgg
ctgacgcagcggatggacgacctgggcggccgggacggctggcgcagcatcacccgctcg
gtgaactcgctgatcgacgacctggcccgcccgacccacgaggtcggccgggtcatcgcg
gccgtcgccgagggcgacctctcccagcacatgccgctggagatcgccggccagccggtg
cgcggcgagttcctgcgcatcggcacgaccgtgaacacgatggtcgaccagctgtcgtcg
ttcgccgacgaggtgacccgggtggcccgcgaggtcggcaccgacggcgcgctgggcggc
caggcgaacgtcaagggcgtctccggcgtctggcgtgacctgaccgagtcggtgaactcg
atggcgggcaacctgaccacccaggtccgcaacatcgccctggtcaccaccgcggtggcc
cagggcgacctgtcgcagaagatcaccgtcgacgcccagggcgagatcgccgagctgaag
tcgaccgtcaacacgatggtcgaccagctctccgcgttcgccgacgaggtcacccgggtg
gccaaggaggtcggcaccgagggacggctcggcggtcaggcccaggtcaagggcgtctcg
ggcgtctggcgggacctgaccgactcggtcaacgtcatggccggcaacctgaccacccag
gtgcgtggcatcgccgagatggcggccgccgtgcagcgcggcgacctgacccgccagatc
accgtcgacgcccgcggcgaggtcgcggcgctggcgcacacgctgaacacgatggtcgac
cagctctcgtcgttcgccgacgaggtcacccgcgtggcctgggaggtcggtaccgagggc
aacctgggtggccaggcgcacgtgcgcggggtctccggggtgtggcgggatctgaccgag
tcggtgaactcgatggcgggcaacctgaccgcccaggtccggaacatcgcgctggtcgcg
aaggcggtggccggcggcgacctctcgcagaagatcaccgtcacggcgcagggcgagatc
gccgagctcaaggaaaccctgaacacgatggtcgaccagctctcgtccttcgccgacgag
gtgacgagggtcgcccgcgaggtgggtaccgagggcaacctcggcgagcaggcgcacgtg
cgcggggtctcgggggtctggcgggacctgaccgagtcggtgaactcgatggccggcaac
ctgaccgcccaggtccgcaacatcgcgctcgtgacgaccgcggtcgccaacggcgacctg
tcccagaagatcaccgtcaacgccgagggtgagatcgcccggctcaaggacaccgtcaac
acgatggtcgaccagctctcgtcgttcgccgacgaggtcacccgggtggcccgcgaggtg
ggcaccgagggcaagctgggcggccaggcgacggtcaccggggtcgccggcacctggcgc
gacctgaccgacaacgtcaaccagctcgcgtccacgctgaccacccagctgcgggcgatc
ggcgacgtgtccacggccgtgacccgcggtgacctgacccggtcgatctcggtcgaggcc
gagggcgaggtcgccgagctcaaggacaacatcaaccagatgatcacccggctgcgcgag
acgaccgatctcaacgcgcagcaggactggctgaagtcgaacctggcccggatcggcagc
aagatgcagggccagcgcgacctgtacgcggtctgccagatgatcatttccgagatgacc
ccggcggtgaacgcccagcagggcacggtctacctgctcgacttcatcgagggcgacaag
ctgcgctacgtcgccggctacggctcggtgccccggcggcgctcggacggcacgttcctg
ttcggcgagggcctgatcggccaggcggcggtcgagaagacccggatccgggtcgagaag
gtgccgccgggctacctgacgatccgcagcggcctgggcagcgcgccgccgagcgacctg
gtcgtcgtgccggtgctgttcgagaaccaggtgctcggcgtgatcgagctggccagcttc
acgccgttctccgacctgcacctgacgctggtcgaccagctcgtcgacaccatcggcgtc
gtgctcaacacgatcatggcgaacgcccggacggaggagctgctggcccagtcgcagcgc
ctcacccaggagctgcgcagccagtcggtcgagctgcagcgcaccaacgcggagctggag
gagaaggcccagctcctggaggagaagaacaccgagatcgagcaggcccgcaccggcctg
gaggagaaggccgagcagctggccctgtcctcgcagtacaagaccgagttcctggccaac
atgagccacgagctgcggaccccgctgaacagcctgctgatcctggcgaagctgctggcc
gacaaccaggacgacaacctgacctaccagcagatcgagttcgccaggacgatccactcg
tccggctccgagctgctcatgctgatcaacgacatcctcgacctgtcgaaggtcgaggcc
ggcaagatggacgtcgaggcgacggccgtgggcaccgcggccatgtgcgacgccctcgcc
caggcggtccggccggtggccgaggtgaagggcctcacgttcgaggtccaggtcgcggac
gacgtgccggccgagttcgtcaccgacgagcagcgcatccagcaggtgctgcgcaacctg
ctgtcgaacgcggtgaagttcaccgactccggcaccgtgcgcctcgacgtcacggtcgcc
tcgtccgacggcccgttcatcgtgccgagcctgcgctcggcgccgacggtgctgtcgttc
gccgtctccgacaccggcatcgggatcgcgacggacaagctgcgcatgatcttcgaggcc
ttccagcaggcggacgggacgacgtcacggcgctacggcggcaccggcctcggcctgtcg
atcagcaaggagatcgcccggctgctgggcggctcgatcgcggtctccagcgtgctgggc
cagggcagcacgttcaccctgtacgtcccgtccgtgatgcccgccgaccagccgttctac
ggaccgatccccggcgagccggacgacgtgctgatcatcatcggcggtgacggggcgctg
tccaccgcgggtgtgccctacgggtcacccctccaggctctcggcagcggcaccggtggc
gatccgtggatcgcggacccggcgcaggccgcgccgttcacggggtccgcgccggtggcg
gcgcccgctgggacgccggagctgggcgcgccatggcacccgaccggcgacctggtcggc
gcgggcgccagccggcccaagctcgagtcctcgataccggagccggtcggcacgccgttc
ctgaccgagacctcgcggccgcgccgggagctcggccccgacgaggtcgacccgctgcag
ggcgcgacggtgctggtcgtcgacgacgacgtccgcaacgtgttcgcgctcaccagcgcg
ctggagatgttcggcatgcgggtgcagtacgcggacaacgggcacgacgccatcagactg
gtgcagcaggcgtcggtcgcgatcagactggtgctgatggacgtgatgctgcccggcatg
gatggcaacgagacgacgtcgaccatccgcgcgatgccggcgttcgccgacctgccgatt
ctggtgctgaccgcgaaggcgatgccgggcgatcgggagaagagcatctcggccggcgcg
agcgactacatcacgaagccggtggacctcgaccatcttctctcggtcatgcgttcccac
atgtcggaccgtccctag
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