Pseudofrankia inefficax: FraEuI1c_0826
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Entry
FraEuI1c_0826 CDS
T01354
Name
(GenBank) putative DNA helicase
Organism
fri
Pseudofrankia inefficax
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTES_1575
AAA_12
AAA_30
AAA_11
AAA_19
nSTAND3
AAA_22
UvrD-helicase
Helicase_RecD
ResIII
UvrD_C_2
SLFN-g3_helicase
DUF559
PhoH
IstB_IS21
CbiA
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADP78904
UniProt:
E3IW62
LinkDB
All DBs
Position
complement(1030876..1036020)
Genome browser
AA seq
1714 aa
AA seq
DB search
METAAAERERFAMLTNRCHRMVRFLHEVAQSQADQVTRVEDNPLALWLAELPGGLSLFEH
ATAGEVVLEAPAAAVLPSPPPLPDALAGWVVLPEPGDLPSDSPPLRETSARAPDQLRWSG
GDPGGWPDGVWPDGIPLRPGGQPVTDGFAEPVRLVDRPEVPEAYQDWLPTWQIWAGRARA
DADRRTLHGTLHSVAGRLAQEGDGLELVLATGLLSWRAPDGRTLRRHLLTTRLAVEIDPV
SSAIRLRVPDGVATRLEDGPLLDGLAVFHEERTNALHERLRARPAAPLGGDDERLLRDWL
TVALDVGHDGYHSSWQPSGPPTDRPRIDLAPAIVLRARGQAALLTYYEQMLDALRGDGRP
PLGLVQLVETLEADERLAWLAAEGAASPSQLSDDPLFPLPANPEQAHVVARLRHDSGVVV
EGPPGTGKTHTIANLVSALLAEGQRVLVTSQKAQALRVLRDKLPESLRRLCVSITDTEGL
GTDELTVSVSALAAEKAAYDPGGQARRIDAARKRRDAAVARRDELAAAIQLQRAAEAIGH
PASEVAPGWSGTRGAIAARVQRERAEHGWLPRPVPLTDAPLLKDDGPDEAMAGDRGAGTA
QSPTGAPPAPPLSAAEATELWALLRAANGPGAASRRPLSAGGPDDADQYGGDDRPDDAWP
GDAWPGDAWPDDGLTSVEPGDPDLGPVSLPSVEALERLLERERDTAAEAGAATRSATGSA
VRAAAAALGVLDATGLDRLTAAVGTVTRALEGARRTARHAPWLPRALDDALIGRDAAVWA
KVTSAASALDEATEALATLGLRAVSLPADVTAAAAAGVVPADPTATPAARLLAVGEALRG
HLDDGGNLRRMFRSRAQKDAADLLDGTTVDGLAPTTAELLDLVLARLRAEVAIDAVARAW
ALAGVMVGFEPRAPLDGPAGDAAAPEARLARLTEAHDALGAIVTVVTARDQIRTLLASLE
AEKAARPSQADPAAPSVGAGLVDLSSTDTLHDLVDAVALARLRLAATQAQGEIDRLRSEV
LAAAGRPAFPAELRQVAATLAARDLAGYRVARRRLLDAAAARRATARRVDLLGRLTAAHP
ALAELLVAAAAQPDSPPPAGDATWPRRLARFEAAWSWGLAAGWLADADAAGTGRARDLPD
LDAQLDAAEDAVAAATAQLAGAKAWQHCLERMGTRESAALRAYADAVGAGGRSGRHAERY
RQAAREAMAIAQTAVPAWVMPIGAVLSTIPAVRDSFDVVIVDEGSQAGLDSLFLLWLAPR
VIIVGDDRQCTPPVTLGRGALVAEAGGGGLDHAGPPAGWASDDADELDPIFRRLDALLPD
LPAWLRVSFTPRSSLFSLLRTRFGEVIRLREHFRCMPEIIEWSSAMFYRDAPLVPLRQFG
ADRLPPLRARHVPHGYTTGEGAGLRNPAEAEALVAQVLECAADPRYDGASFGVVVLQGTG
QAELIRALLGARLPAAEQLRRRLRVGTPPDFQGDERDVVFLSMVVAPGAPAIALTRQEYQ
RRFNVAASRARDQVWLFHSAGLEDLDPGDLRHSYLSFVLAHSQADERAVEEPPRLDEVAP
DIPHPRFDSLFEQRVFRELTSAGYQVTPQVEVNGRRIDLVVAGGRARLAVECDGDAVETT
AQVAHDFARERQLRRAGWPFWRVRQSDFESDPVAALASLWPRLAAAGITPVDGSAPSRED
GAPAVGSGPVATAPTAGWRPMALSDQDGLDDDLG
NT seq
5145 nt
NT seq
+upstream
nt +downstream
nt
atggagacggcggcggctgagcgggaacgcttcgcgatgcttaccaaccggtgtcaccgg
atggtgcggttcctgcacgaggtggcgcagtcccaggctgaccaggtgacgcgggtcgag
gacaacccgctggccctgtggctcgccgagctgcccggcggcctgtcgctgttcgagcac
gcgacggccggcgaggtcgtgctggaggcgccggccgcggccgtgctgccctcgccgccg
ccgctgccggacgcgctcgccggctgggtggtgctgcccgagccgggtgacctcccgtcc
gactcgccgccgctgcgcgagacgagcgcgcgagcccccgaccagctgcgctggtccggc
ggggacccgggcggctggccggacggggtctggccggacggcatcccgctgcgccccggc
ggccagccggtcaccgacgggttcgccgagccggtccgcctggtcgaccgcccggaggtg
ccggaggcctaccaggactggctgccgacctggcagatctgggccggccgagcccgggcc
gacgccgacaggcgcaccctgcacggcacgctgcacagcgtcgccggccggctcgcccag
gagggcgacgggctggagctggtgctcgccaccggcctgctgtcctggcgcgccccggac
ggccggacgctgcggcgccacctgctgaccacccggctggccgtcgagatcgacccggtg
agctcggcgatccggctgcgcgtcccggacggggtcgcgacccggctggaggacggcccg
ctgctcgacggcctcgccgtcttccacgaggagcgcaccaacgcgctgcacgagcggctg
cgggcccggccggcggccccgttgggcggggacgacgaacggctgctgcgggactggctg
acggtcgcgctcgacgtcggccacgacggctaccactcgtcctggcagccgtccgggccg
ccgaccgaccggccgcggatcgacctcgccccggcgatcgtgctgcgcgcccgcggccag
gccgcgctgctcacctactacgagcagatgctcgacgcgctgcgcggggacggccgcccg
ccgctgggcctcgtccagctggtggagacgctggaggccgacgagcggctggcgtggctg
gccgccgagggcgccgcgagccccagccagctgtccgacgatccgctgttcccgctgccg
gcgaaccccgagcaggcgcatgtggtggcccggctgcgccacgacagcggcgtggtcgtc
gaggggccgccgggcaccggcaagacccacacgatcgccaacctggtctcggccctgctc
gccgagggccagcgcgtcctggtgaccagccagaaggcacaggcgctgcgggtgctgcgc
gacaagctgcccgagtcgctgcggcgcctgtgcgtgtcgatcaccgacaccgaggggcta
ggcaccgacgagctcacggtcagcgtcagcgccctggccgccgagaaggcggcctacgac
cccggcggccaggcccgccgcatcgacgccgcccgcaagcgcagggacgccgccgtggcc
cgccgggacgagctggccgcggccatccagctccagcgagccgccgaggcgatcggccat
ccggcgagcgaggtcgcccccggctggtccggcacccgcggcgcgatcgccgccagggtc
cagcgggagcgggccgagcacggctggctgccgcgcccggttcccctgacggacgcaccg
ctgctcaaggacgacggccctgacgaggccatggcgggcgaccggggcgcgggcaccgcc
cagtccccgaccggcgccccacccgcgcccccgttgagcgcggccgaggccaccgagctg
tgggcgctgctgcgggccgccaacgggcccggcgccgcgagccggcggcccctgagcgcc
ggcggtccggacgacgccgaccagtacggcggcgacgaccggcccgacgacgcttggccc
ggcgacgcttggcccggcgacgcttggcccgacgacggcctgaccagcgtcgagcccggc
gatcccgacctcggcccggtgtccctgcccagcgtcgaggccctcgaacggctgctggaa
cgcgagcgggacacggcggcggaggcgggagcggccacccgctccgcgacgggatcggcc
gtccgcgcggccgccgccgcgctgggcgtccttgacgcgaccggcctggaccggctcacg
gccgcggtgggcaccgtcacccgcgcgctggagggggcgcgccgcaccgcgcggcacgcg
ccctggctgccacgagcgctggacgacgccctcatcggccgcgacgccgccgtctgggcg
aaggtcacgtcggccgcctccgcgctcgacgaggcgaccgaggcgctcgcgacgctcggg
ctgcgcgccgtcagcctgcccgccgacgtgaccgccgccgcggccgccggagtggtgccc
gccgaccccaccgccacgcccgccgcgcggctgctcgccgtcggcgaggccctgcgcggg
catctggacgacggcggcaacctgcgccggatgttccggtcccgggcgcagaaggacgcc
gccgacctgctcgacgggacgacggtcgacgggctcgcgccgaccaccgctgagctgctt
gacctggtgctcgccaggctgcgggccgaggtcgctatcgacgccgtggccagggcctgg
gcgctcgccggcgtcatggtcggcttcgagccccgggccccgctcgacgggccggccggg
gacgccgccgcgcccgaggcccggctcgctcggctcaccgaggcccacgacgcgctcggc
gcgatcgtcacggtcgtcacggctcgcgaccagatccgcaccctgctcgcgtcgctggag
gccgagaaggccgcgcgcccgagccaggccgatcccgccgcgccttccgtcggcgccggg
cttgtcgacctgagctcgaccgacacgctgcacgacctggtcgacgccgtcgccctggcc
cggctgcgactcgccgccacgcaggctcagggggagatcgaccggctgcgctccgaggtg
ctggccgccgccgggcggccggccttcccggccgagctgcgccaggtcgcggccaccctc
gcggcccgggacctggccggctaccgcgtcgcgcgccgccggctgctggacgcggccgcg
gcccgccgggccaccgcccgacgggtggacctgctcggtcgactgacggccgcgcacccg
gccctcgccgagctgctggtcgccgcggcggcccagcccgactccccgccgcccgcgggc
gacgccacgtggccgcgccggctcgcccgtttcgaggcggcctggtcgtggggcctggcc
gccggctggctcgccgacgcggacgcggccgggacgggcagggcccgtgacctgcccgac
ctcgacgcccagctcgacgccgccgaggacgcggtggccgcggcgacggcccagctcgcc
ggggccaaggcctggcagcactgcctggaacgcatgggtacccgcgagtcggccgcgctg
cgtgcctacgccgacgccgtcggggccggtggccggtccgggcggcacgcggagcgctac
cggcaggctgcccgggaggcgatggcgatcgcccagacggccgttcccgcgtgggtcatg
ccgatcggcgcggtgctgtccacgatccccgccgtccgcgacagcttcgacgtcgtgatc
gtcgacgagggcagccaggccggcctggacagcctgttcctgctgtggctcgcaccccgg
gtgatcatcgtcggcgacgaccggcagtgcacgccgccggtcaccctcggccgcggggcc
ctcgtcgcggaggccggcggtggcggtctcgaccacgccggcccgccggccggctgggcg
tccgacgacgccgacgagctggacccgatcttccgccggctggacgcgctgctgccggac
ctgcccgcctggctgcgggtctcgttcaccccgcgctccagcctgttcagcctgctgcga
acccggttcggcgaggtcatccggctgcgcgagcacttccgctgcatgccggagatcatc
gagtggtcgtcggccatgttctaccgggacgcgccgctggtgccgctgcgccagttcggc
gccgaccggctgcctccgctgcgggcccggcacgtcccgcacggctacacgacgggcgag
ggcgccgggctgcgcaacccggccgaggccgaggcgctggtcgcgcaggtgctggagtgc
gcggccgacccgcgctatgacggcgcctcgttcggtgtcgtggtcctgcagggcaccggc
caggccgagctgatccgcgcgctgttgggggcgcggctgccggccgccgaacagctgcgc
cgcaggctacgggtcggcaccccgccggatttccagggcgacgagcgggacgttgtgttc
ctgtcgatggtcgtcgcgccgggcgcgccggccatcgcgctgacccgccaggagtaccag
cggcggttcaacgtcgccgcctcgcgcgctcgcgaccaggtctggctcttccactccgcc
gggctcgaggacctcgaccccggcgacctgcggcacagctacctgtccttcgtgctggcg
cacagccaggccgacgagcgggcggtcgaggagccaccgcgcctcgacgaggtcgccccg
gacatcccgcaccctcggttcgactcgctgttcgagcagcgggtgttccgcgagctcacg
agcgccggctaccaggtgaccccgcaggtggaggtgaacggccggcggatcgacctggtg
gtcgccggtggccgggcccgcctggcggtcgagtgcgacggggacgcggtcgagaccacg
gcccaggtcgcgcacgacttcgccagggagcgccagctgcgccgggccggctggccgttc
tggcgggtccgccagtccgacttcgagtcggacccggtcgcggccctggccagcctgtgg
ccccgcctcgccgccgcgggcatcactccggtggacggctccgcgccatcgcgggaggac
ggcgcgccggccgtcggctccggcccggtcgccacggcgcccacggccggttggcggccc
atggcgctgtccgaccaggacgggctcgacgacgacctcggctag
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