Pseudofrankia inefficax: FraEuI1c_0827
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Entry
FraEuI1c_0827 CDS
T01354
Name
(GenBank) UvrD/REP helicase
Organism
fri
Pseudofrankia inefficax
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
AAA_11
PHP_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
ADP78905
UniProt:
E3IW63
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All DBs
Position
1036304..1039912
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AA seq
1202 aa
AA seq
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MADDGGELDGMPAESGPAGASSAPFYVDLHVHSKYSRACSRDCDLEHLAWWAARKGIRVV
GTGDFTHPAWAQELEDKLVAAEPGLFRLRPDLEQDVLRRLPASCRTATRFLLSTEISTIY
KKGDRTRKVHHLLYAPDREAAGRITAALARIGNLAADGRPILGLDSRHLLEITLQSDPGS
YLVPAHVWTPWFAVLGSKSGFDAVDDCYDDLAHEVFALETGLSADPEMFWRISGLDRYRL
VSNSDAHSPPMLGREATALSCDLDYFAIKDALRTGAGYTGTVEFFPEEGKYHHDGHRACG
VRFTPEETKASGGACPACGKPLTVGVLHRVDALADRETLHVPATAGQVRSFVALPEIVGE
ILGVGPKSKAVATQVGSLVERLGPELGILGDVELAAIGEAGSAELVEAVGRLRRGEVLRE
AGFDGEYGVIRMFAPGELGGEAATLFDLAPTVPAAKPRRAAVPSPRQPPSPASAERASSE
PASSEPALVEPAVAEPVTVNPAVAEPAGEPGTLETAGLASAGGSASVLDGLDADQRAAAA
VTAGPLVILAGPGTGKTRTLVHAIAHRVRERGVPAGECLAVTFTRRAADELVERLDQLLA
APRAGGGDGRPDQRVTATTFHGLGLLVIREQHIRLARGPHVQVADDAVRAELLAEALGDA
AGTVAARAAAARRIGELKRRRSLGDQVRGDELAGVLARYDAALRERDLVDLDDLLALPLA
LLTAEPELAEGYRRRFRHVWVDEYQDVDETQYRLLRALCPPDGNLTVIGDPDQAIYSFRG
ADVGFFLRFEQDFPAARSAALTRNYRSTGTIVAAARRAIAPASFVPGRELVAVHPDGPDA
PRSPAGQPAPAGPGGAPVLVRACASEAEEALAVVDTIEAALGGTSFHALDSFAPAQLEAG
RLAAGGHLSFADIAVLYRTARQAEPVMAALARRGFPFQRRSHGPLADAPGVAALLAELRA
ERRDGAARSVSAALRDAAARAAERATARGTVLATVLGAGQPERPGPPHEQTDPPGASSEA
EIRLGVELLAPAAASAGDDLAGFLTAVSLATEADTLDPRADRISLLTLHAAKGLEFGLVL
IVGCEDGLLPMTWGRPSRLGDRAEPGQAATAGPDTAVDGRAGAATDPARGPLAEERRLFF
VGITRARGRLILSHVTVGAGGTVRRAPSPFLADLDPRLLDRVTGRPGQLPRQRPAGKQLR
LL
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
gtggcggatgacggcggcgagctggacgggatgcccgccgagagcggcccggcgggcgct
tcgtcggcgccgttctacgtcgacctgcacgtgcactcgaagtactcgcgggcgtgcagc
cgcgactgcgacctggagcatctggcctggtgggcggcccgcaaggggatccgggtcgtc
ggaacaggggacttcacccacccggcgtgggcccaggagctcgaggacaagctggtggcg
gccgagcctgggctgttccggctgaggcccgacctggagcaggacgtgctgcggcggctg
cccgcgtcctgccggaccgcgacccggttcctgctgtccaccgagatctcgacgatctac
aagaagggcgacaggacccggaaggtccaccatctgctctacgccccggaccgggaggcg
gccggccggatcaccgcggccctcgcccggatcggcaacctcgccgccgacggccgaccg
atcctcgggctcgactcccggcacctgctcgagatcaccctccagtccgacccgggcagc
tacctcgtccccgcgcacgtctggaccccgtggttcgcggtcctcggctcgaagtccggg
ttcgacgccgtcgacgactgctacgacgacctcgcgcacgaggtcttcgccctggagacc
gggctgtccgccgacccggagatgttctggcggatctccgggctcgaccggtaccggctc
gtgtccaactcggacgcgcactcgccgcccatgctcggccgcgaggccaccgcgctgtcc
tgcgacctggactatttcgcgatcaaggatgcgctccggaccggggccggctacacgggg
accgtcgagttcttcccggaggaggggaagtaccaccacgacggccaccgggcctgcggc
gtgcgcttcacgcccgaggagaccaaggcgtccggcggtgcctgcccggcctgtggcaag
ccgctgaccgtcggcgtgctgcaccgcgtcgacgcgctcgccgaccgggagacgctccac
gtgccggcgacggccgggcaggtgcgctcgttcgtcgcgctgccggagatcgtcggcgag
atcctcggggtcgggccgaagagcaaggcggtggcgacgcaggtcggctcgctcgtcgaa
cggctcggcccggagctgggcatcctcggcgacgtcgagctcgccgcgatcggtgaggca
ggctcggcggagctggtcgaggcggttggccggctgcgccgtggcgaggtgctgcgggag
gccggcttcgacggcgagtacggcgtgatccggatgttcgcccccggcgagctcggcggc
gaggcggcgaccctgttcgacctggcgccgaccgttccggccgcgaagcccaggcgagcg
gccgtgccaagcccgcgccagccaccgagtccggcctcggctgaacgggcctcgtctgag
ccggcctcgtctgagccggccctggtcgagccagcggtggcggagcccgtcacggtgaac
cccgccgtggcggagcctgccggcgagccggggacgctggagacggccgggctggcctcc
gccggcgggtcggcgtccgtcctggacggcctggacgccgaccagcgcgcggcggcggcc
gtcaccgctggtccgctggtgatcctggccgggcccggcacgggcaagacgcggacgctg
gtacacgcgatcgcgcaccgggtgcgggaacggggcgtcccggccggggagtgcctcgcc
gtcacgttcacccggcgggcggccgacgagctggtggaacgcctcgaccagctgctcgcc
gcgccgcgggccggtggcggggacggccggccggaccagcgcgtcacggccacgacgttc
cacggccttggcctgctggtcatccgcgagcagcacatccggctcgcccggggcccgcac
gtccaggtcgccgacgacgcggtccgggccgagctgctggccgaggcgctcggggacgcc
gccggcacggtcgccgcccgggccgcggccgcgcggcggatcggcgagctcaagcgacgc
cgttcgctgggggaccaggtacgcggcgacgagctggccggcgtcctcgcccgctacgac
gccgcgctgcgcgagcgcgacctggtggacctcgacgacctgttggcgctgccgctcgcc
ctgctgaccgccgagccggagctggccgagggctaccggcgccggttccggcacgtctgg
gtcgacgagtaccaggacgtcgacgagacccagtaccggctgctgcgggcactgtgcccg
ccggacgggaacctgaccgtgatcggcgacccggaccaggcgatctactccttccggggc
gccgacgtcggcttcttcctgcgcttcgagcaggacttcccggccgcccggagtgccgcg
ctgacccgcaactaccgctcgaccgggacgatcgtcgccgcggcccggcgcgctatcgcg
ccggccagcttcgtccccggccgcgagctggtcgcggtccacccggacggcccggacgcg
ccgcggtcgccggccgggcagccggccccggccgggccgggcggggcgccggtgctggta
cgggcctgcgctagcgaggcggaggaggcgctcgccgtcgtcgacacgatcgaggcggcc
ctcggtggaacctccttccacgcgctcgacagcttcgcacccgcccagctggaggcgggc
cggctcgccgccggcggccacctgtcgttcgccgacatcgccgtgctgtaccggaccgcc
cggcaggccgaaccggtcatggctgcgctggccaggcgcggcttccccttccagcggcgt
tcgcacgggccgctcgccgacgcgcctggcgtcgccgcgctgctcgccgagctgcgggcc
gagcgccgggacggcgcggcccgctcggtgtccgccgcgctgcgcgacgcggcggcccgg
gccgccgagcgggccaccgcccgcggcacggtgctcgccacggtcctgggcgcgggccag
cccgagcggcctgggccgccgcacgagcagactgatccgccgggcgcctcgtccgaggcg
gagatccggctgggcgtcgagctgctggcgccggccgcggcctcggcgggggacgacctg
gccgggttcctcacggcggtctcgctggccaccgaggccgacaccctcgacccacgtgcc
gaccggatctcgctgctcaccctgcacgccgccaagggcctggagttcggcctggtcctc
atcgtcggctgcgaggacggcctgctcccgatgacctggggccggccgtcgcgcctgggc
gacagggccgagcccggccaggccgcgacggctggaccggacacggccgtcgacggtcgg
gccggcgcggcgaccgatccggcccgcggcccactggccgaggaacggcggctgttcttc
gtcggaatcacccgggcccgcggccggctcatcctgagccatgtgaccgtcggcgccggc
ggcaccgtcaggcgggccccgtcgccgttcctggccgacctcgacccgcgtctgctcgac
cgcgtgacgggccgtcccggccagctcccgcggcaacggccggccggcaaacaactccgg
ctgctctga
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