Pseudofrankia inefficax: FraEuI1c_0922
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Entry
FraEuI1c_0922 CDS
T01354
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00300
Lysine biosynthesis
fri00470
D-Amino acid metabolism
fri01100
Metabolic pathways
fri01110
Biosynthesis of secondary metabolites
fri01120
Microbial metabolism in diverse environments
fri01230
Biosynthesis of amino acids
Module
fri_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FraEuI1c_0922
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FraEuI1c_0922
Enzymes [BR:
fri01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FraEuI1c_0922
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADP78995
UniProt:
E3IXH8
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All DBs
Position
1152979..1154388
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AA seq
469 aa
AA seq
DB search
MSQASGASATTPVAVPVAPLEEQVWPATAALDSDGVLRVGGLRVDELADEFGTPAFFLDE
DDFRARAQAWRAGFPDGDVYYAGKAFLCRAVARWVADEGLSLDVCTGGELAVAASVDFPP
ARLLFHGNNKSVEELRRAVAYGVGRIVLDSFAEIERLATVARAAGVRQRVLIRVTPGVEA
HTHEYIATGQEDQKFGFSLASGAALDAIGRVLAATDALELVGLHAHIGSQIFDTAGFGLA
AHRMVGLLATVRDAHGVELPELDLGGGLGIAYTGEDAPLPVADVADRLHTIVGKECASAG
LAVPRLAVEPGRAMVGPTTITLYRVGTVKELPGLRTYVSVDGGMSDNIRTALYDARYTAR
LVSRPGAAEHHVVTLVGKHCESGDVVAHDVSLPADVAPGDLVAVPATGAYHRSMASNYNH
VGRPPVVAVRAGAARVVVRRETEDDLLRLDVDDPAGAGAAGPKPGEAGR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagcctcgggcgcctcggcgacgacgccggtggcggtacccgtggcgccgctg
gaggaacaggtgtggccggcgacggccgcgctcgactccgacggggtgctgcgggtcggt
ggcctgcgggtcgacgagctggccgacgagttcggcacaccggccttcttcctcgacgag
gacgacttccgggcccgcgcccaggcgtggcgggccggcttcccggacggggacgtctac
tacgccggcaaggccttcctgtgccgggcggtggcccgctgggtcgcggacgagggcctg
agcctggacgtctgcaccggtggcgagctggccgtcgcagcgtcggtggacttcccgccg
gcccggctgctgttccacggcaacaacaagtccgtcgaggagctgcgccgggcggtcgcc
tacggtgtgggccggatcgtgctcgactccttcgccgagatcgagcggctcgccaccgtg
gcccgcgccgccggtgtccgccagcgggtgctgatccgcgtcaccccgggcgtcgaggcg
cacacccacgagtacatcgccaccggccaggaggaccagaagttcggcttctcgctggcc
agcggtgccgcgcttgacgccatcggccgggtgctggccgccacggacgcgctggagctc
gtcggcctgcacgcgcacatcggctcgcagatcttcgacacggccggtttcggcctggcc
gcccaccggatggtcggcctgctcgccaccgtccgcgacgcccacggcgtcgagctgccc
gagctcgacctcggcggcggcctcggcatcgcgtacaccggcgaggacgcgccgctgccc
gtcgcggacgtcgccgaccggctgcacacgatcgtcggcaaggagtgcgccagcgcgggg
ctcgcggttccgcggctggctgtcgagccgggccgggcgatggtcgggccgaccacgatc
accctctaccgggtcggcaccgtcaaggaactgccaggcctgcgcacctacgtcagcgtc
gacggcggcatgagcgacaacatccgcaccgccctctacgacgcccgctacaccgcccgg
ctggtctcccggccgggcgcggccgagcaccacgtcgtcaccctggtcgggaagcactgc
gagtccggtgacgtggtcgcgcacgacgtctcgctgcccgcggacgtcgcgccaggcgac
ctggtcgccgtccccgccaccggtgcctaccaccgctcgatggccagcaactacaaccac
gtcggccgcccgccggtcgtcgccgtccgcgccggcgccgcgcgggtcgtcgtccggcgt
gagacggaggacgacctgctgcgcctggacgtcgacgatccggccggcgcgggcgccgcc
gggccgaaaccgggggaggctggccgatga
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