Pseudofrankia inefficax: FraEuI1c_1026
Help
Entry
FraEuI1c_1026 CDS
T01354
Name
(GenBank) transcriptional regulator, Crp/Fnr family
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
fri
Pseudofrankia inefficax
Pathway
fri02020
Two-component system
fri02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FraEuI1c_1026
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FraEuI1c_1026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
fri03000
]
FraEuI1c_1026
Transcription factors [BR:
fri03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
FraEuI1c_1026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
MarR_2
GntR
HTH_23
HTH_24
Sigma70_r4_2
HVO_A0261_N
MarR
HTH_ParB
HTH_3
wHTH-PRTase_assc
DUF1670
Motif
Other DBs
NCBI-ProteinID:
ADP79099
UniProt:
E3IYW1
LinkDB
All DBs
Position
1293849..1294529
Genome browser
AA seq
226 aa
AA seq
DB search
MLDDDEAVALLRATTLLKELDEEDLRRLAARAVTRRYRRGQVVFTEGEPADTLLVVAQGR
LKVLTKADDGRDHVLNIHGPRETIGELNIVEPGTRSASVEALEPSTALVLDRTAVWELVK
ERPAVAEQLIRALVAHVRRLTGANADLVFLDLPRRVAKLLLMRAREASRPVIELGLTQTE
IASLLGGSRQSVNQALREFERRSWILSEGQTITILQLDRLRRFAGD
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgacgacgaggcggtcgcgctgctccgggcgaccacgctgctgaaggagctc
gacgaggaggacctgcggcggctcgctgcccgcgccgtgacgcgccgttaccggcgcggc
caggtcgtcttcaccgagggggagcccgcggacaccctgctggtggtggcccagggccgg
ctgaaggtgctcaccaaggccgatgacggccgtgaccatgtactgaacatccacggacca
cgagaaacgatcggcgagctgaacatcgtcgagccggggacgaggtcggcgagcgtcgag
gcgctcgaaccgagcacggcgctcgtgctcgaccgcaccgcggtctgggagctggtgaag
gaacgaccggcggtcgccgagcagctcatccgcgcgctcgtcgcccacgtgcgcaggctc
accggggcgaacgccgacctggtgttcctggacctgccccgccgcgtggccaagctgctg
ctcatgcgagcccgtgaggccagccggccggtgatcgagctcggcctcacccagaccgag
atcgcgtcgctgctcggcggttcccggcagtcggtgaaccaggcgctgcgggagttcgaa
cgccgcagctggatcctttccgagggtcagacgatcaccatcctgcagctcgaccggctt
cgccgcttcgccggcgactag
DBGET
integrated database retrieval system
