Pseudofrankia inefficax: FraEuI1c_1038
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Entry
FraEuI1c_1038 CDS
T01354
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fri03032
]
FraEuI1c_1038
03036 Chromosome and associated proteins [BR:
fri03036
]
FraEuI1c_1038
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_1038
DNA replication proteins [BR:
fri03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
FraEuI1c_1038
Chromosome and associated proteins [BR:
fri03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
FraEuI1c_1038
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
FraEuI1c_1038
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
DUF2267
HU-HIG
HU-CCDC81_euk_2
Lmo2446-like_N
PEP-utilisers_N
SSPI
DUF2960
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ADP79111
UniProt:
E3IYX3
LinkDB
All DBs
Position
1310369..1310650
Genome browser
AA seq
93 aa
AA seq
DB search
MNKSQLVDRIAQQIEGGRSNATKAVDAVFHAIQEAVSAGEKVTITGFGVFERVERAERTG
RNPATGEPVHVPASVVPKFRPGSEFKSSVSSNG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcccaattggttgaccgcattgcccagcagatcgagggtggacggtccaac
gcgaccaaggctgtcgacgcggtcttccacgcgatccaggaagccgtctccgccggcgag
aaggtgacgatcaccggattcggtgtcttcgagcgcgtcgagcgcgccgagcggaccggg
cgcaacccggcgacgggcgagccggtgcacgtccccgcctccgtcgtcccgaagttccgc
ccgggctcggagttcaagtccagcgtctcctcgaacggctga
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