Pseudofrankia inefficax: FraEuI1c_1064
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Entry
FraEuI1c_1064 CDS
T01354
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fri03036
]
FraEuI1c_1064
Chromosome and associated proteins [BR:
fri03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
FraEuI1c_1064
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADP79137
UniProt:
E3J001
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All DBs
Position
1335834..1339493
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AA seq
1219 aa
AA seq
DB search
MYLKSLTLRGFKSFASSTTLRLEPGITCVVGPNGSGKSNVVDAMAWVLGEQGAKALRGGT
MSDVIFAGTPSRPALGRAEVLLTIDNSDGALPIEYSEVTVGRLMFRSGQSEYTINGTSCR
LLDIQELMSDSGIGRELHVIVGQGQLDAVLHASPEERRAFIEEAAGVLKHRKRKEKALRK
LEAMAANLTRLTDLSAELRRQLGPLGRQAEIARKAGVIQATLRDARLRLLADDLVTARVE
LAADIADEETVRAKLTETEGAHAAAVEREGALEQELARLVPRAAAAQETWYALSGVRERL
RGTGQLASERARLLRAGAQATRGGRDPEELEQEAAAVREREAALLVRLDRDRDTLADVVD
RRSELERALAAEEQALLAATRAAAARREGLARLAGKVEAARSRAASAEADIVRLTEALDA
AQARDAEASGSRSALDTELARIEAEREELADRHESAVALHTAANERLEALRSAERAADRD
RASAAARREALSLSLSPADGAAALLTATAGPREPGAAERTGSDRATAGKPGGGKPAKGKA
PAPVPDPPDTPIQVVGRLATILAVTPGAEVAIAAALGQAADALAVGSVDDVVTALRWLRS
AEAGRAAFVPASPAPPAPARPTELPSGAVAALDLVRVVDDRFAPAVAAILGAVVVVDDLS
DAAKLAGLRPDLAMVTRDGDVLGPPAAIGGSAHAPSLLELAAAADEAAAAMDTAAAKADA
ARVAMEPAREEVARTRAAIDAASSGRSAANGRHRALTEQLAQLDRGRGSVAGEISRLERN
RLAAEATRDQAYGALGELEAQLSASDEEPDEEDLPADERDRLVAATSAVRGEEVEARLAV
RTAEERARGLAGRADALVRQATQERTARAAAARTRALREQQAKIAAAVAAVVQDALAACE
TSLAAAAAEREQTDAARRSTDTELAGVRDRVRAYAAALAALRDEAHRDELAREAKRLRSE
ALEAKSLEEHGIAADDLVAEYGPELPVPPDEEGGATRPFDRTEQAARLATAEKQLTRLGK
INPLALEEFEALQERAAFLSAQLDDIKNTRRDLLLVVDEVDSRVREVFAAAFHDTAREFE
IVFDTLFPGGEGKLVLTDPDDMLATGIEVEARPPGKKVKRLSLLSGGERSLTALALLLAI
FRARPSPFYVLDEVEAALDDRNLGRLLNAVEGLRSKSQLIIITHQKRTMEIADALYGVSM
RGDGVTTVISQRLRERASA
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctcaagagcctgacattgcggggcttcaagtccttcgcgagttcgaccacgctg
cgcctcgagcccgggatcacctgtgtggtgggcccgaacggctcgggcaagagcaacgtc
gtcgacgcgatggcctgggtgctcggcgagcagggcgcgaaggcgctgcgcggcggcacc
atgtcggacgtcatcttcgccggaaccccgtcgcgcccggccctcggccgggccgaggtg
ctcctcacgatcgacaactccgacggcgcgctgcccatcgaatacagcgaggtcaccgtc
ggccggctgatgttccgcagcgggcagagcgagtacacgatcaacggcacgtcctgccgg
ctgctggacatccaggagctgatgagcgactccggcatcgggcgtgagctgcacgtcatc
gtcggccagggccagctcgacgcggtgctgcacgcgagccccgaggagcgccgggccttc
atcgaggaggcggccggcgtcctgaagcaccgcaagcgcaaagagaaggcgctgcgcaag
ctggaggcgatggcggccaacctgacccggctgaccgacctgtcggccgagctgcgccgc
cagctgggcccgctcggccggcaggccgagatcgcgcgcaaggccggcgtcatccaggcc
accctgcgcgacgcccggctgcggctgctcgccgacgacctcgtcaccgccagggtggag
ctggccgcggacatcgccgacgaggagaccgtccgcgccaagctcaccgagaccgagggg
gcccacgccgccgcggtcgagcgggagggcgccctggagcaggagctggcccggctggtg
ccgcgggccgccgcggcccaggagacctggtacgcgctgtccggggtccgcgaacggctg
cgtggcaccggccagctcgcgtccgagcgggccaggctgctgcgtgccggcgcccaggcc
acccgcggcgggcgtgacccggaagagctggagcaggaggccgctgccgtccgggagcgg
gaggccgcgctgctcgtccggctcgaccgggaccgggacaccctggccgacgtcgtggac
cgccggtccgagctggaacgggccctcgccgccgaggaacaggcgctgctcgccgccacc
cgcgcggccgcggcccggcgcgaaggcctggcgcggctcgccggcaaggtcgaggccgcc
cgttccagggccgcctccgccgaggcggacatcgtccggctgaccgaggccctggacgcg
gcgcaggcccgcgacgccgaggccagcggctcccggtccgccctggacaccgagctcgcc
aggatcgaggccgagcgcgaggagctggccgaccggcacgagtccgccgtcgccctgcac
accgccgcgaacgagcggctggaggcgctgcgctcggccgagcgggcggccgaccgggac
cgggcatccgccgcggcccgccgcgaggccctctcgctgtcgctctcgccggcagacggc
gcggcggcgctgctcaccgccacggccggtccgcgggagcccggcgcggccgagcggacc
gggtccgaccgggccacagctggcaagccgggcggcggcaagccggccaagggaaaggcc
ccggccccggtcccggacccgcctgacaccccgatccaggtcgtcggccggctcgcgacg
atcctcgcggtcacccccggcgcggaggtggcgatcgccgccgccctgggccaggcggcc
gacgcgctcgccgtcggctccgtcgacgacgtcgtcaccgcgctgcggtggctgcggtcc
gccgaggccggccgggccgccttcgtccccgcttccccggcgccgcccgccccggccagg
ccgacggagctgccgtccggcgcggtcgccgcgctcgacctggtccgggtggtggacgac
cggttcgccccggccgtcgccgcgatcctcggcgcggtcgtcgtcgtcgacgacctgtcc
gacgccgcgaagctcgccgggctgcgtcccgatctcgcgatggtcacccgcgacggtgac
gtgctgggcccgcccgccgccatcggcggcagcgcgcacgcgccgtcgctgctggagctc
gccgccgccgccgacgaggccgccgccgcgatggacacggcggccgcgaaggccgacgcc
gcccgcgtcgcgatggagccggcccgcgaggaggtcgccaggacgcgcgccgcgatcgac
gcggccagctccgggcgctcggccgcgaacgggcgccaccgggcgctgaccgagcagctc
gcccagctcgaccggggccggggctccgtcgccggtgagatcagccggctggagcgcaac
cggctcgccgccgaggcgacccgcgaccaggcctacggcgccctgggggagctggaggcc
cagctgtccgcgagcgacgaggagcccgacgaggaggaccttcccgcggacgagcgggac
cggttggtcgccgccacctccgccgtgcgcggcgaggaggtcgaggcccggctcgccgtg
cgcaccgccgaggagcgggcccgtggcctcgccggccgggccgacgcgctggtccgccag
gccacgcaggaacggaccgcccgcgcggccgccgccaggacccgggcgctgcgcgagcag
caggcgaagatcgcggccgcggtcgccgccgtcgtccaggacgcgctcgccgcctgcgag
acgtcgctcgccgccgccgcggccgagcgcgagcagaccgacgcggcccgacggtccacc
gacaccgagctcgccggggtccgcgaccgggtccgggcctacgcggcggcgctcgccgcg
ctgcgggacgaggcgcaccgcgacgagctggcccgcgaggccaagcggctgcgctccgag
gcgctggaggccaagtcgctggaggagcacggcatcgcggccgacgacctcgtcgccgag
tacggccccgaactgccggttccgccggacgaggagggcggcgcgacgcggcccttcgac
cggaccgagcaggcggcgcgcctcgcgacggccgagaagcagctgaccaggctcgggaag
atcaacccgctggcgctggaggagttcgaggccctgcaggagcgggccgcgttcctctcg
gcccagctggacgacatcaagaacacccggcgggacctgctgctcgtcgtcgacgaggtg
gactcgcgggtgcgcgaggtgttcgccgccgcgttccacgacaccgcgcgtgagttcgag
atcgtcttcgacacgctgttccccggcggcgagggcaagctggtgctcaccgatcccgac
gacatgctggccacgggcatcgaggtcgaggcccggccgccgggcaagaaggtcaagcgg
ctgtcgctgctgtccggcggcgagcgctccttgacggcgctcgcgctgctactggcgatc
ttccgggcccgcccgtcgcccttctacgtgctcgacgaggtcgaggcggcgctcgacgac
cgcaacctgggccggctgctgaacgccgtcgagggcctgcggtcgaagtcccagctgatc
atcatcacccaccagaagcgcacgatggagatcgcggacgcgctgtacggcgtgtcgatg
cgcggcgacggcgtgaccacggtgatcagccagcgcctccgcgagcgcgcctcggcttga
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