Pseudofrankia inefficax: FraEuI1c_1105
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Entry
FraEuI1c_1105 CDS
T01354
Name
(GenBank) phosphoesterase RecJ domain protein
KO
K06881
bifunctional oligoribonuclease and PAP phosphatase NrnA [EC:
3.1.3.7
3.1.13.3
]
Organism
fri
Pseudofrankia inefficax
Pathway
fri00920
Sulfur metabolism
fri01100
Metabolic pathways
fri01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09100 Metabolism
09102 Energy metabolism
00920 Sulfur metabolism
FraEuI1c_1105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fri03400
]
FraEuI1c_1105
Enzymes [BR:
fri01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.7 3'(2'),5'-bisphosphate nucleotidase
FraEuI1c_1105
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.3 oligonucleotidase
FraEuI1c_1105
DNA repair and recombination proteins [BR:
fri03400
]
Prokaryotic type
Other factors with a suspected DNA repair function
Others
FraEuI1c_1105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
DUF2240
Motif
Other DBs
NCBI-ProteinID:
ADP79178
UniProt:
E3J042
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Position
1378551..1379753
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AA seq
400 aa
AA seq
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MSPGVPSGPAEPSRKVVAAPGRPPAWPDPVALLRTALADGWTVGLFAHVNPDSDTLGSAL
ALGLALRGAGGTVAVSFDAEPFQVPDGLAFLPGHDLLVAPARLPERLDLVVTLDAAAPHM
LGVLADRMAAAPRTLVVDHHRSGADFGQVRMVDPDAPSTSTVVLQLLDRLGLALTADVAT
ALYAGLATDTGSFRQATTSAAAHRAAARLVDAGADPTVIGWSVWGIHRFGYVGLLAEVLG
RAGLSECSGAEGHRLAWTYITDADLARHGLRLEHVEGVVDVLWGVLEADLAAVAKELPDR
GWTVSLRSRGPIDVGAVAMGLGGGGHREKAGFMVSAASGQTAAGQAGPGDVRPDDEERVG
RIVAAILNQVRRHASGHSGDGPTGTTTIRVAHLAAAPRPF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgagccccggggttccttccggcccggcggagccgagccggaaggtcgtggcggcgccc
ggtcggccgccggcctggccggacccggtcgcgttgctgcgcacggcactggccgacggc
tggacggtcgggctgttcgcccacgtcaacccggactcggacacgttgggttcggccctc
gccctcggcctcgcgctgcgcggcgccggcgggacggtggccgtctcgttcgacgccgag
ccgttccaggtgccggacgggctcgcgttcctgccgggccacgatctgctggtcgcgccc
gcgcggctgccggagcggctcgacctggtggtcacgctcgacgccgcggcgccgcacatg
ctcggcgtcctcgccgaccggatggccgccgcgccccgcaccctggtcgtcgaccaccac
cgctccggggccgacttcggccaggtccggatggtcgatccggacgcgccgtccacctcg
acggtggtgcttcaactgctcgaccggctgggcctcgcgttgaccgccgacgtcgcgacc
gcgctctacgccgggctcgcgaccgacaccggctcgttccggcaggccaccacctcggcc
gcggcgcaccgcgcggcggcccggctggtcgacgccggtgccgacccgaccgtgatcggc
tggtcggtctggggaatccaccggttcggttacgtgggcctgctcgccgaggtgctgggc
cgcgcgggcctgtccgaatgctccggcgccgaagggcatcggctggcctggacctacatc
accgacgcggacctggcccggcacggactgcgcctcgagcacgtcgaaggcgtcgtcgac
gtgctgtggggggtgctggaggcggatctcgccgccgtcgccaaggagctgcccgaccga
ggctggaccgtctcgctgcgctcgcgcgggccgatcgacgtcggtgccgtggcgatgggc
ctcggtggcggcgggcatcgggagaaggccggcttcatggtcagcgcggcctcgggccag
accgccgcgggccaggcggggcccggggacgtacggcctgacgacgaggagcgcgtcggc
cggatcgtggcggcgatcctgaaccaggtacgccgccacgcctccgggcacagtggcgac
ggcccgacgggcacgaccacgatccgcgtcgcccacctggccgccgcgccgcgcccgttc
tga
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