Pseudofrankia inefficax: FraEuI1c_1106
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Entry
FraEuI1c_1106 CDS
T01354
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fri
Pseudofrankia inefficax
Brite
KEGG Orthology (KO) [BR:
fri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fri03016
]
FraEuI1c_1106
Enzymes [BR:
fri01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FraEuI1c_1106
Transfer RNA biogenesis [BR:
fri03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FraEuI1c_1106
Prokaryotic type
FraEuI1c_1106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADP79179
UniProt:
E3J043
LinkDB
All DBs
Position
1379787..1380740
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AA seq
317 aa
AA seq
DB search
MTLPTTSRAEPSQVPAAPLPAPDGLVIVDKPAGWTSHDVVAKARRILRTRKIGHAGTLDP
MATGVLVLGVGRATKLLGHLALTDKEYEAVIRLGVTTVTDDAEGEPVEERPVDATADALA
AAIGRLTGEIDQVPSSVSAVKIDGKRAYARVRSGEEVQLAPRRVTVSAFELRERRDRDTG
APDPAGTDLAVRVACSSGTYVRALARDVGADLGCGGHLTYLRRTRVGPFEVADALDLDAF
AERAATAVTPLAAAVTSAFPVRRVDADEADAVAHGRRLPAAGLPGPYGVVAGDGAALALA
EDHGRESRYLVVFAPAG
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
gtgaccttgccaacgacgtcccgggccgagccgtcgcaggtgcctgccgcccccctgccg
gctcctgacggtctggtgatcgtcgacaagccggccggctggacctcgcacgacgtcgtc
gcgaaggcgcggcggatcctgcgtacccgcaagatcggccacgccggcaccctcgacccg
atggcgaccggcgtgctggtgctcggggtcggccgggcgaccaagctgctcggccacctc
gcgctcaccgacaaggagtacgaggcggtcatccggctcggtgtcacgacggtcacggac
gacgcggagggcgagcccgtcgaggagcgcccggtggacgccacggcggacgcgctcgcc
gccgcgatcggccggctcaccggggagatcgaccaggtcccgtccagtgtcagcgccgtg
aagatcgacgggaagcgtgcctacgcccgggtccggtccggcgaggaggtccagctggcc
cctcgtcgcgtcaccgtcagcgccttcgagctgcgcgagcggcgggaccgggacaccggc
gcccccgaccccgcgggcacggatctcgcggttcgggtcgcctgctccagcggcacgtac
gtccgggccctcgcccgcgacgtcggcgcggacctcggctgtggcggccatctgacctac
ctgcgccgcacccgcgtcggcccgttcgaggtcgcggacgcgctggacctggacgccttc
gccgagcgggcggccaccgcggtcacgccgctggcggccgccgtcaccagcgcctttccc
gtccggcgggtggacgccgacgaggcggacgccgtcgcccacggccgccgtcttcccgcg
gccggtctgcccggcccctacggcgtcgtggccggggatggggccgcgctcgccctcgcc
gaggaccacggccgggagtcccgctatctggtggtcttcgcgcccgcgggctga
DBGET
integrated database retrieval system
